Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
VPS11Q9H270 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS11Q9H270 MIR4787-201ENST00000607364 84 ntBASIC21.75■■□□□ 1.07
VPS11Q9H270 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS11Q9H270 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
VPS11Q9H270 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS11Q9H270 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.74■■□□□ 1.07
VPS11Q9H270 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS11Q9H270 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 Z92544.1-202ENST00000571933 1220 ntBASIC21.74■■□□□ 1.07
VPS11Q9H270 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS11Q9H270 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.74■■□□□ 1.07
VPS11Q9H270 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VPS11Q9H270 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
VPS11Q9H270 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.74■■□□□ 1.07
VPS11Q9H270 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
VPS11Q9H270 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
VPS11Q9H270 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
VPS11Q9H270 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.72■■□□□ 1.07
VPS11Q9H270 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 AC010997.5-201ENST00000609182 354 ntBASIC21.72■■□□□ 1.07
VPS11Q9H270 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VPS11Q9H270 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.72■■□□□ 1.07
VPS11Q9H270 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
VPS11Q9H270 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.71■■□□□ 1.07
VPS11Q9H270 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS11Q9H270 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.71■■□□□ 1.07
VPS11Q9H270 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
VPS11Q9H270 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS11Q9H270 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
VPS11Q9H270 TSPY9P-201ENST00000440215 945 ntBASIC21.71■■□□□ 1.07
VPS11Q9H270 TSPY11P-201ENST00000442607 1045 ntBASIC21.71■■□□□ 1.07
VPS11Q9H270 AC239859.2-201ENST00000444165 318 ntBASIC21.71■■□□□ 1.07
VPS11Q9H270 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS11Q9H270 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS11Q9H270 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VPS11Q9H270 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.71■■□□□ 1.07
VPS11Q9H270 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
VPS11Q9H270 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
VPS11Q9H270 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
VPS11Q9H270 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
VPS11Q9H270 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.7■■□□□ 1.06
VPS11Q9H270 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
VPS11Q9H270 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
VPS11Q9H270 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.7■■□□□ 1.06
VPS11Q9H270 C17orf82-201ENST00000623772 1530 ntBASIC21.7■■□□□ 1.06
VPS11Q9H270 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
VPS11Q9H270 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
VPS11Q9H270 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.69■■□□□ 1.06
VPS11Q9H270 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VPS11Q9H270 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS11Q9H270 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.69■■□□□ 1.06
VPS11Q9H270 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
VPS11Q9H270 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
VPS11Q9H270 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms