Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 UNC93B8-201ENST00000511903 705 ntBASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 FAM99A-202ENST00000538190 1989 ntBASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
POLR2J3Q9H1A7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 AL024507.2-201ENST00000606070 2574 ntBASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.98■□□□□ 0.79
POLR2J3Q9H1A7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
POLR2J3Q9H1A7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
POLR2J3Q9H1A7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
POLR2J3Q9H1A7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 AL031602.1-201ENST00000633169 911 ntBASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
POLR2J3Q9H1A7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 KRT16P3-201ENST00000439127 1283 ntBASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
POLR2J3Q9H1A7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms