Protein–RNA interactions for Protein: Q9H158

PCDHAC1, Protocadherin alpha-C1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1Q9H158 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHAC1Q9H158 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 FEM1AP4-201ENST00000443167 1987 ntBASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHAC1Q9H158 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 AC137630.3-201ENST00000607245 391 ntBASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHAC1Q9H158 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHAC1Q9H158 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 YBX1P4-201ENST00000392794 808 ntBASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHAC1Q9H158 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.88
PCDHAC1Q9H158 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 FP325331.1-202ENST00000623531 1380 ntBASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHAC1Q9H158 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PCDHAC1Q9H158 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.55■□□□□ 0.88
PCDHAC1Q9H158 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms