Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM2Q9C040 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM2Q9C040 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
TRIM2Q9C040 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM2Q9C040 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM2Q9C040 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM2Q9C040 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM2Q9C040 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM2Q9C040 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
TRIM2Q9C040 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRIM2Q9C040 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM2Q9C040 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 AC068587.7-201ENST00000641602 218 ntBASIC19.9■□□□□ 0.78
TRIM2Q9C040 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM2Q9C040 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM2Q9C040 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TRIM2Q9C040 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
TRIM2Q9C040 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.89■□□□□ 0.77
TRIM2Q9C040 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM2Q9C040 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM2Q9C040 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM2Q9C040 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM2Q9C040 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM2Q9C040 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM2Q9C040 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM2Q9C040 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.88■□□□□ 0.77
TRIM2Q9C040 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM2Q9C040 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM2Q9C040 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.87■□□□□ 0.77
TRIM2Q9C040 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRIM2Q9C040 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 OR2I1P-207ENST00000453522 948 ntBASIC19.87■□□□□ 0.77
TRIM2Q9C040 DUX4L19-201ENST00000557448 1267 ntBASIC19.87■□□□□ 0.77
TRIM2Q9C040 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.87■□□□□ 0.77
TRIM2Q9C040 AC110285.6-201ENST00000617652 491 ntBASIC19.87■□□□□ 0.77
TRIM2Q9C040 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
TRIM2Q9C040 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRIM2Q9C040 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.86■□□□□ 0.77
TRIM2Q9C040 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.86■□□□□ 0.77
TRIM2Q9C040 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRIM2Q9C040 AC096631.2-201ENST00000436136 790 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms