Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LIMD2Q9BT23 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 AL035685.1-201ENST00000636663 812 ntBASIC12.81□□□□□ -0.36
LIMD2Q9BT23 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 ESRRAP2-201ENST00000418437 1549 ntBASIC12.81□□□□□ -0.36
LIMD2Q9BT23 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC12.81□□□□□ -0.36
LIMD2Q9BT23 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 ME2-208ENST00000638937 2471 ntTSL 5 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 TRIR-205ENST00000592273 783 ntTSL 3 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 AL117332.1-201ENST00000622628 974 ntBASIC12.8□□□□□ -0.36
LIMD2Q9BT23 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LIMD2Q9BT23 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 OR2A1-AS1-204ENST00000470435 602 ntBASIC12.79□□□□□ -0.36
LIMD2Q9BT23 CREM-229ENST00000474362 1030 ntTSL 2 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 DUX4L4-201ENST00000566884 1269 ntBASIC12.79□□□□□ -0.36
LIMD2Q9BT23 AL356740.2-201ENST00000601559 647 ntBASIC12.79□□□□□ -0.36
LIMD2Q9BT23 AC241377.3-202ENST00000626088 1088 ntBASIC12.79□□□□□ -0.36
LIMD2Q9BT23 AC241585.3-202ENST00000628937 1088 ntBASIC12.79□□□□□ -0.36
LIMD2Q9BT23 AC245100.8-202ENST00000629247 1058 ntBASIC12.79□□□□□ -0.36
LIMD2Q9BT23 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
LIMD2Q9BT23 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 AC092171.4-201ENST00000609130 632 ntBASIC12.78□□□□□ -0.36
LIMD2Q9BT23 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LIMD2Q9BT23 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
LIMD2Q9BT23 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms