Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 YIL047C-AYIL047C-A 369 nt2.79□□□□□ -1.96
ATG40Q99325 TIS11YLR136C 858 nt2.79□□□□□ -1.96
ATG40Q99325 DCS1YLR270W 1053 nt2.79□□□□□ -1.96
ATG40Q99325 REH1YLR387C 1299 nt2.79□□□□□ -1.96
ATG40Q99325 IMP1YMR150C 573 nt2.79□□□□□ -1.96
ATG40Q99325 YNR071CYNR071C 1029 nt2.79□□□□□ -1.96
ATG40Q99325 PTM1YKL039W 1572 nt2.78□□□□□ -1.96
ATG40Q99325 CHK1YBR274W 1584 nt2.78□□□□□ -1.96
ATG40Q99325 MEK1YOR351C 1494 nt2.78□□□□□ -1.96
ATG40Q99325 YDR098C-AYDR098C-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YDR210C-CYDR210C-C 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YDR261C-CYDR261C-C 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YDR316W-AYDR316W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YDR365W-AYDR365W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YER137C-AYER137C-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YER159C-AYER159C-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YGR027W-AYGR027W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YGR038C-AYGR038C-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YGR161C-CYGR161C-C 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YJR026WYJR026W 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YJR028WYJR028W 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YAR010CYAR010C 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YLR157C-AYLR157C-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YLR227W-AYLR227W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YLR256W-AYLR256W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YML040WYML040W 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YML045W-AYML045W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YMR051CYMR051C 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YNL054W-AYNL054W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YOL103W-AYOL103W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YPL257W-AYPL257W-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YPR137C-AYPR137C-A 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YPR158C-CYPR158C-C 1323 nt2.78□□□□□ -1.96
ATG40Q99325 YNR063WYNR063W 1824 nt2.78□□□□□ -1.96
ATG40Q99325 ZDS2YML109W 2829 nt2.78□□□□□ -1.96
ATG40Q99325 STE14YDR410C 720 nt2.78□□□□□ -1.96
ATG40Q99325 COS12YGL263W 1143 nt2.78□□□□□ -1.96
ATG40Q99325 GTF1YGR102C 552 nt2.78□□□□□ -1.96
ATG40Q99325 SNL1YIL016W 480 nt2.78□□□□□ -1.96
ATG40Q99325 DLS1YJL065C 504 nt2.78□□□□□ -1.96
ATG40Q99325 TTI2YJR136C 1266 nt2.78□□□□□ -1.96
ATG40Q99325 YIM2YMR151W 438 nt2.78□□□□□ -1.96
ATG40Q99325 INN1YNL152W 1230 nt2.78□□□□□ -1.96
ATG40Q99325 RPS7AYOR096W 573 nt2.78□□□□□ -1.96
ATG40Q99325 COA2YPL189C-A 207 nt2.78□□□□□ -1.96
ATG40Q99325 CMD1YBR109C 444 nt2.78□□□□□ -1.96
ATG40Q99325 CKS1YBR135W 453 nt2.78□□□□□ -1.96
ATG40Q99325 SPS2YDR522C 1509 nt2.78□□□□□ -1.97
ATG40Q99325 YLR177WYLR177W 1887 nt2.77□□□□□ -1.97
ATG40Q99325 DYN1YKR054C 12279 nt2.77□□□□□ -1.97
ATG40Q99325 EXO5YBR163W 1758 nt2.77□□□□□ -1.97
ATG40Q99325 FBP26YJL155C 1359 nt2.77□□□□□ -1.97
ATG40Q99325 TRP4YDR354W 1143 nt2.77□□□□□ -1.97
ATG40Q99325 MRT4YKL009W 711 nt2.77□□□□□ -1.97
ATG40Q99325 TVP18YMR071C 504 nt2.77□□□□□ -1.97
ATG40Q99325 GOT1YMR292W 417 nt2.77□□□□□ -1.97
ATG40Q99325 IMP4YNL075W 873 nt2.77□□□□□ -1.97
ATG40Q99325 SPO1YNL012W 1896 nt2.77□□□□□ -1.97
ATG40Q99325 SIZ1YDR409W 2715 nt2.77□□□□□ -1.97
ATG40Q99325 RIF1YBR275C 5751 nt2.76□□□□□ -1.97
ATG40Q99325 DNM1YLL001W 2274 nt2.76□□□□□ -1.97
ATG40Q99325 CMK1YFR014C 1341 nt2.76□□□□□ -1.97
ATG40Q99325 PFK26YIL107C 2484 nt2.76□□□□□ -1.97
ATG40Q99325 CIN8YEL061C 3003 nt2.76□□□□□ -1.97
ATG40Q99325 RPA190YOR341W 4995 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)DtK(UUU)D 73 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)G1tK(UUU)G1 73 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)G2tK(UUU)G2 73 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)KtK(UUU)K 73 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)LtK(UUU)L 73 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)OtK(UUU)O 73 nt2.76□□□□□ -1.97
ATG40Q99325 tK(UUU)PtK(UUU)P 73 nt2.76□□□□□ -1.97
ATG40Q99325 YAL065CYAL065C 387 nt2.76□□□□□ -1.97
ATG40Q99325 CDC73YLR418C 1182 nt2.76□□□□□ -1.97
ATG40Q99325 YMR122W-AYMR122W-A 255 nt2.76□□□□□ -1.97
ATG40Q99325 VPS21YOR089C 633 nt2.76□□□□□ -1.97
ATG40Q99325 MET16YPR167C 786 nt2.76□□□□□ -1.97
ATG40Q99325 STE6YKL209C 3873 nt2.75□□□□□ -1.97
ATG40Q99325 NUP85YJR042W 2235 nt2.75□□□□□ -1.97
ATG40Q99325 YDR133CYDR133C 336 nt2.75□□□□□ -1.97
ATG40Q99325 PHO92YDR374C 921 nt2.75□□□□□ -1.97
ATG40Q99325 RRP17YDR412W 708 nt2.75□□□□□ -1.97
ATG40Q99325 RAI1YGL246C 1164 nt2.75□□□□□ -1.97
ATG40Q99325 YKR075CYKR075C 924 nt2.75□□□□□ -1.97
ATG40Q99325 YMR084WYMR084W 789 nt2.75□□□□□ -1.97
ATG40Q99325 OPY1YBR129C 987 nt2.75□□□□□ -1.97
ATG40Q99325 SHE3YBR130C 1278 nt2.75□□□□□ -1.97
ATG40Q99325 SIP1YDR422C 2448 nt2.75□□□□□ -1.97
ATG40Q99325 MUP3YHL036W 1641 nt2.75□□□□□ -1.97
ATG40Q99325 PUS9YDL036C 1389 nt2.74□□□□□ -1.97
ATG40Q99325 HFD1YMR110C 1599 nt2.74□□□□□ -1.97
ATG40Q99325 SYT1YPR095C 3681 nt2.74□□□□□ -1.97
ATG40Q99325 AIM14YGL160W 1713 nt2.74□□□□□ -1.97
ATG40Q99325 SQS1YNL224C 2304 nt2.74□□□□□ -1.97
ATG40Q99325 RCR2YDR003W 633 nt2.74□□□□□ -1.97
ATG40Q99325 SUP56tL(CAA)A 82 nt2.74□□□□□ -1.97
ATG40Q99325 SUP53tL(CAA)C 82 nt2.74□□□□□ -1.97
ATG40Q99325 tL(CAA)DtL(CAA)D 82 nt2.74□□□□□ -1.97
ATG40Q99325 tL(CAA)G1tL(CAA)G1 82 nt2.74□□□□□ -1.97
ATG40Q99325 SUP54tL(CAA)G2 82 nt2.74□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 33.7 ms