Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 AC087742.1-201ENST00000575880 1738 ntBASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.54■■□□□ 1.2
CDK5RAP1Q96SZ6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CDK5RAP1Q96SZ6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CDK5RAP1Q96SZ6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.19
CDK5RAP1Q96SZ6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
CDK5RAP1Q96SZ6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CDK5RAP1Q96SZ6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 AC137767.1-201ENST00000602918 1920 ntBASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 KRT18P5-201ENST00000436075 1291 ntBASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 LINC00526-201ENST00000581067 1875 ntBASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 AC005224.4-201ENST00000583262 1652 ntBASIC22.49■■□□□ 1.19
CDK5RAP1Q96SZ6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 NTF6G-201ENST00000591094 616 ntBASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CDK5RAP1Q96SZ6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 AP004607.7-201ENST00000527152 1677 ntBASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CDK5RAP1Q96SZ6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDK5RAP1Q96SZ6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms