Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40CQ96S21 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB40CQ96S21 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40CQ96S21 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40CQ96S21 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40CQ96S21 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB40CQ96S21 Z98882.1-201ENST00000622160 2253 ntBASIC17.54■□□□□ 0.4
RAB40CQ96S21 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB40CQ96S21 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB40CQ96S21 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB40CQ96S21 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB40CQ96S21 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
RAB40CQ96S21 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB40CQ96S21 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB40CQ96S21 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB40CQ96S21 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAB40CQ96S21 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40CQ96S21 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB40CQ96S21 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40CQ96S21 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB40CQ96S21 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB40CQ96S21 AL033527.3-201ENST00000566366 1196 ntBASIC17.52■□□□□ 0.4
RAB40CQ96S21 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB40CQ96S21 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC17.52■□□□□ 0.4
RAB40CQ96S21 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40CQ96S21 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40CQ96S21 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAB40CQ96S21 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.52■□□□□ 0.39
RAB40CQ96S21 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40CQ96S21 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAB40CQ96S21 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.51■□□□□ 0.39
RAB40CQ96S21 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.51■□□□□ 0.39
RAB40CQ96S21 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAB40CQ96S21 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 DUX4L4-201ENST00000566884 1269 ntBASIC17.5■□□□□ 0.39
RAB40CQ96S21 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAB40CQ96S21 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAB40CQ96S21 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB40CQ96S21 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.49■□□□□ 0.39
RAB40CQ96S21 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAB40CQ96S21 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.49■□□□□ 0.39
RAB40CQ96S21 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 AC074183.2-201ENST00000623112 922 ntBASIC17.49■□□□□ 0.39
RAB40CQ96S21 FEM1AP4-201ENST00000443167 1987 ntBASIC17.49■□□□□ 0.39
RAB40CQ96S21 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAB40CQ96S21 LINC01521-201ENST00000504184 1943 ntBASIC17.49■□□□□ 0.39
RAB40CQ96S21 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAB40CQ96S21 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms