Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 AC104187.1-201ENST00000607510 612 ntBASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSMD1Q96PZ7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 MKRN4P-201ENST00000444706 1521 ntBASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.61■□□□□ 0.57
CSMD1Q96PZ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 RCN1P1-201ENST00000400413 996 ntBASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD1Q96PZ7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD1Q96PZ7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 MIR4758-201ENST00000577688 71 ntBASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD1Q96PZ7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 MIPEPP3-201ENST00000412105 444 ntBASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 ALDH1A3-203ENST00000557963 1670 ntBASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
CSMD1Q96PZ7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 AC079140.4-201ENST00000507448 529 ntBASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD1Q96PZ7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD1Q96PZ7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms