Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC25.72■■□□□ 1.71
NEK1Q96PY6 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.72■■□□□ 1.71
NEK1Q96PY6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
NEK1Q96PY6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.72■■□□□ 1.71
NEK1Q96PY6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
NEK1Q96PY6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
NEK1Q96PY6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK1Q96PY6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK1Q96PY6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK1Q96PY6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 AC110285.6-201ENST00000617652 491 ntBASIC25.71■■□□□ 1.71
NEK1Q96PY6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK1Q96PY6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK1Q96PY6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
NEK1Q96PY6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.71■■□□□ 1.71
NEK1Q96PY6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
NEK1Q96PY6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
NEK1Q96PY6 OXCT2P1-201ENST00000447263 1535 ntBASIC25.7■■□□□ 1.7
NEK1Q96PY6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NEK1Q96PY6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
NEK1Q96PY6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.7■■□□□ 1.7
NEK1Q96PY6 AC106739.1-201ENST00000617035 715 ntBASIC25.7■■□□□ 1.7
NEK1Q96PY6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
NEK1Q96PY6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
NEK1Q96PY6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NEK1Q96PY6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
NEK1Q96PY6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
NEK1Q96PY6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.69■■□□□ 1.7
NEK1Q96PY6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
NEK1Q96PY6 AC233992.3-201ENST00000607491 485 ntBASIC25.69■■□□□ 1.7
NEK1Q96PY6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
NEK1Q96PY6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
NEK1Q96PY6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
NEK1Q96PY6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
NEK1Q96PY6 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.68■■□□□ 1.7
NEK1Q96PY6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
NEK1Q96PY6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
NEK1Q96PY6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC25.67■■□□□ 1.7
NEK1Q96PY6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.67■■□□□ 1.7
NEK1Q96PY6 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.67■■□□□ 1.7
NEK1Q96PY6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.67■■□□□ 1.7
NEK1Q96PY6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
NEK1Q96PY6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK1Q96PY6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NEK1Q96PY6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK1Q96PY6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.66■■□□□ 1.7
NEK1Q96PY6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.66■■□□□ 1.7
NEK1Q96PY6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.66■■□□□ 1.7
NEK1Q96PY6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
NEK1Q96PY6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.66■■□□□ 1.7
NEK1Q96PY6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC25.66■■□□□ 1.7
NEK1Q96PY6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.65■■□□□ 1.7
NEK1Q96PY6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
NEK1Q96PY6 OR7E47P-201ENST00000546390 1422 ntBASIC25.65■■□□□ 1.7
NEK1Q96PY6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC25.65■■□□□ 1.7
NEK1Q96PY6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.65■■□□□ 1.7
NEK1Q96PY6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
NEK1Q96PY6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.65■■□□□ 1.7
NEK1Q96PY6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
NEK1Q96PY6 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.7
NEK1Q96PY6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.64■■□□□ 1.7
NEK1Q96PY6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
NEK1Q96PY6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.64■■□□□ 1.7
NEK1Q96PY6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
NEK1Q96PY6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms