Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.07■□□□□ 0.48
GAFA1Q96PS6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 OR7E47P-201ENST00000546390 1422 ntBASIC18.06■□□□□ 0.48
GAFA1Q96PS6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.06■□□□□ 0.48
GAFA1Q96PS6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 MIR572-201ENST00000384983 95 ntBASIC18.05■□□□□ 0.48
GAFA1Q96PS6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GAFA1Q96PS6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GAFA1Q96PS6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 SMUG1P1-201ENST00000590640 811 ntBASIC18.03■□□□□ 0.48
GAFA1Q96PS6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 AC105233.4-201ENST00000642045 216 ntBASIC18.03■□□□□ 0.48
GAFA1Q96PS6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GAFA1Q96PS6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
GAFA1Q96PS6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.02■□□□□ 0.47
GAFA1Q96PS6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
GAFA1Q96PS6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
GAFA1Q96PS6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
GAFA1Q96PS6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
GAFA1Q96PS6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 AC092053.2-201ENST00000640557 1818 ntBASIC18.01■□□□□ 0.47
GAFA1Q96PS6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GAFA1Q96PS6 IRS3P-201ENST00000223076 1006 ntBASIC18.01■□□□□ 0.47
GAFA1Q96PS6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms