Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SPG11Q96JI7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.51■□□□□ 0.55
SPG11Q96JI7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.51■□□□□ 0.55
SPG11Q96JI7 AC098590.1-201ENST00000468126 897 ntBASIC18.51■□□□□ 0.55
SPG11Q96JI7 AC083880.1-201ENST00000608266 535 ntBASIC18.51■□□□□ 0.55
SPG11Q96JI7 AC013268.1-206ENST00000638368 961 ntBASIC18.51■□□□□ 0.55
SPG11Q96JI7 AC112229.1-201ENST00000639295 961 ntBASIC18.51■□□□□ 0.55
SPG11Q96JI7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.51■□□□□ 0.55
SPG11Q96JI7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPG11Q96JI7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SPG11Q96JI7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPG11Q96JI7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPG11Q96JI7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.51■□□□□ 0.55
SPG11Q96JI7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SPG11Q96JI7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPG11Q96JI7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SPG11Q96JI7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SPG11Q96JI7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPG11Q96JI7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.5■□□□□ 0.55
SPG11Q96JI7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.5■□□□□ 0.55
SPG11Q96JI7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SPG11Q96JI7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.5■□□□□ 0.55
SPG11Q96JI7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPG11Q96JI7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SPG11Q96JI7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SPG11Q96JI7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SPG11Q96JI7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPG11Q96JI7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPG11Q96JI7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPG11Q96JI7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SPG11Q96JI7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPG11Q96JI7 AC055733.4-201ENST00000638462 1354 ntBASIC18.49■□□□□ 0.55
SPG11Q96JI7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SPG11Q96JI7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.49■□□□□ 0.55
SPG11Q96JI7 MIR4758-201ENST00000577688 71 ntBASIC18.49■□□□□ 0.55
SPG11Q96JI7 AC079630.1-202ENST00000618127 1840 ntBASIC18.49■□□□□ 0.55
SPG11Q96JI7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.49■□□□□ 0.55
SPG11Q96JI7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPG11Q96JI7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.49■□□□□ 0.55
SPG11Q96JI7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.49■□□□□ 0.55
SPG11Q96JI7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SPG11Q96JI7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 MKRN4P-201ENST00000444706 1521 ntBASIC18.48■□□□□ 0.55
SPG11Q96JI7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SPG11Q96JI7 AC010536.3-201ENST00000620306 533 ntBASIC18.48■□□□□ 0.55
SPG11Q96JI7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.48■□□□□ 0.55
SPG11Q96JI7 AC068587.7-201ENST00000641602 218 ntBASIC18.48■□□□□ 0.55
SPG11Q96JI7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.47■□□□□ 0.55
SPG11Q96JI7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPG11Q96JI7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.47■□□□□ 0.55
SPG11Q96JI7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.47■□□□□ 0.55
SPG11Q96JI7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPG11Q96JI7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPG11Q96JI7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.47■□□□□ 0.55
SPG11Q96JI7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.47■□□□□ 0.55
SPG11Q96JI7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SPG11Q96JI7 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SPG11Q96JI7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 DUSP5P2-201ENST00000426873 1033 ntBASIC18.46■□□□□ 0.55
SPG11Q96JI7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.46■□□□□ 0.55
SPG11Q96JI7 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.46■□□□□ 0.55
SPG11Q96JI7 AC009237.3-201ENST00000393279 1427 ntBASIC18.46■□□□□ 0.55
SPG11Q96JI7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.46■□□□□ 0.55
SPG11Q96JI7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SPG11Q96JI7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SPG11Q96JI7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SPG11Q96JI7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SPG11Q96JI7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms