Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PDLIM5Q96HC4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 SLC47A1P1-202ENST00000449666 945 ntBASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 OR7E47P-201ENST00000546390 1422 ntBASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.25■□□□□ 0.99
PDLIM5Q96HC4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.24■□□□□ 0.99
PDLIM5Q96HC4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 UNC93B3-201ENST00000308076 687 ntBASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PDLIM5Q96HC4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
PDLIM5Q96HC4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 FAM99A-202ENST00000538190 1989 ntBASIC21.21■□□□□ 0.99
PDLIM5Q96HC4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 BX842568.3-201ENST00000418104 571 ntBASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PDLIM5Q96HC4 AC010542.4-201ENST00000563151 1910 ntBASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.19■□□□□ 0.98
PDLIM5Q96HC4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms