Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
LRRC58Q96CX6 AC021242.3-201ENST00000607598 1377 ntBASIC20.6■□□□□ 0.89
LRRC58Q96CX6 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 KRT8P33-201ENST00000508125 1423 ntBASIC20.6■□□□□ 0.89
LRRC58Q96CX6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC58Q96CX6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 FEM1AP4-201ENST00000443167 1987 ntBASIC20.59■□□□□ 0.89
LRRC58Q96CX6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LRRC58Q96CX6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC58Q96CX6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC58Q96CX6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC58Q96CX6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
LRRC58Q96CX6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC58Q96CX6 AC073130.3-201ENST00000624389 2278 ntBASIC20.58■□□□□ 0.88
LRRC58Q96CX6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC58Q96CX6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 AF106564.1-201ENST00000607058 2553 ntBASIC20.57■□□□□ 0.88
LRRC58Q96CX6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC58Q96CX6 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.56■□□□□ 0.88
LRRC58Q96CX6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 AL031848.2-201ENST00000607670 837 ntBASIC20.56■□□□□ 0.88
LRRC58Q96CX6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC58Q96CX6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC58Q96CX6 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRRC58Q96CX6 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms