Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTHRC1Q96CG8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 OR7E47P-201ENST00000546390 1422 ntBASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 TSPY26P-201ENST00000476365 1326 ntBASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTHRC1Q96CG8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTHRC1Q96CG8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTHRC1Q96CG8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 SMUG1P1-201ENST00000590640 811 ntBASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTHRC1Q96CG8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 MIR572-201ENST00000384983 95 ntBASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTHRC1Q96CG8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CTHRC1Q96CG8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.14■□□□□ 0.82
CTHRC1Q96CG8 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
CTHRC1Q96CG8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTHRC1Q96CG8 C11orf96-202ENST00000528572 1834 ntBASIC20.13■□□□□ 0.81
CTHRC1Q96CG8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTHRC1Q96CG8 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTHRC1Q96CG8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTHRC1Q96CG8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTHRC1Q96CG8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms