Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
RAPGEF4Q8WZA2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 UBE2DNL-204ENST00000602536 740 ntBASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 AL050303.2-201ENST00000619798 666 ntBASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 AC231657.2-201ENST00000624556 255 ntBASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.66■■■□□ 2.18
RAPGEF4Q8WZA2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 DUX4L16-201ENST00000555130 1264 ntBASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
RAPGEF4Q8WZA2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 AL121832.2-201ENST00000610979 668 ntBASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC28.64■■■□□ 2.18
RAPGEF4Q8WZA2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
RAPGEF4Q8WZA2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC28.64■■■□□ 2.17
RAPGEF4Q8WZA2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC28.63■■■□□ 2.17
RAPGEF4Q8WZA2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.62■■■□□ 2.17
RAPGEF4Q8WZA2 AC083906.2-201ENST00000511578 360 ntBASIC28.62■■■□□ 2.17
RAPGEF4Q8WZA2 AP001160.3-201ENST00000601484 763 ntBASIC28.62■■■□□ 2.17
RAPGEF4Q8WZA2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF4Q8WZA2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RAPGEF4Q8WZA2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 AC007322.1-201ENST00000426983 750 ntBASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 AC142086.2-201ENST00000569753 217 ntBASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
RAPGEF4Q8WZA2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 ANOS2P-203ENST00000472227 1816 ntBASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 AC005181.1-201ENST00000604782 1256 ntBASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 AC055733.4-201ENST00000638462 1354 ntBASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
RAPGEF4Q8WZA2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 MYCNOS-205ENST00000641950 531 ntBASIC28.59■■■□□ 2.17
RAPGEF4Q8WZA2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 DUSP8P5-201ENST00000422884 1815 ntBASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 APTR-205ENST00000447009 902 ntTSL 2 BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 TSPY6P-201ENST00000448518 926 ntBASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
RAPGEF4Q8WZA2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.58■■■□□ 2.16
RAPGEF4Q8WZA2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
RAPGEF4Q8WZA2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.57■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms