Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CNIH3Q8TBE1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.78■□□□□ 0.76
CNIH3Q8TBE1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CNIH3Q8TBE1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNIH3Q8TBE1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
CNIH3Q8TBE1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CNIH3Q8TBE1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 LINC01006-201ENST00000333319 2292 ntBASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CNIH3Q8TBE1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 MIR4281-201ENST00000580852 62 ntBASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CNIH3Q8TBE1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CNIH3Q8TBE1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 AC019171.1-201ENST00000601251 1056 ntBASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNIH3Q8TBE1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms