Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 OXCT2P1-201ENST00000447263 1535 ntBASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 AC091305.1-201ENST00000479476 895 ntBASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 IGHV3-19-201ENST00000521488 291 ntBASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ATPAF2Q8N5M1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 LINC00526-201ENST00000581067 1875 ntBASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 RASA4CP-201ENST00000424092 1398 ntBASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ATPAF2Q8N5M1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 EP400NL-214ENST00000641289 2402 ntBASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 AC142381.2-201ENST00000566120 298 ntBASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ATPAF2Q8N5M1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
ATPAF2Q8N5M1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 AC092053.2-201ENST00000640557 1818 ntBASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 AL136967.2-201ENST00000623968 743 ntBASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ATPAF2Q8N5M1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 MIR638-201ENST00000385237 100 ntBASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 SUDS3P1-201ENST00000505831 966 ntBASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 OR7E47P-201ENST00000546390 1422 ntBASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ATPAF2Q8N5M1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 TSPY26P-201ENST00000476365 1326 ntBASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 AC005837.3-201ENST00000612163 286 ntBASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ATPAF2Q8N5M1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 AC079834.2-201ENST00000609776 1949 ntBASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.17■■□□□ 1.14
ATPAF2Q8N5M1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.16■■□□□ 1.14
ATPAF2Q8N5M1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.16■■□□□ 1.14
ATPAF2Q8N5M1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms