Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.37■□□□□ 0.53
ZNF561Q8N587 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZNF561Q8N587 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.37■□□□□ 0.53
ZNF561Q8N587 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.36■□□□□ 0.53
ZNF561Q8N587 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF561Q8N587 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
ZNF561Q8N587 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZNF561Q8N587 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 LINC01960-201ENST00000563759 1884 ntBASIC18.35■□□□□ 0.53
ZNF561Q8N587 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 AC136469.2-201ENST00000623944 1028 ntBASIC18.35■□□□□ 0.53
ZNF561Q8N587 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ZNF561Q8N587 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF561Q8N587 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF561Q8N587 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF561Q8N587 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF561Q8N587 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF561Q8N587 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 OR2I1P-207ENST00000453522 948 ntBASIC18.34■□□□□ 0.53
ZNF561Q8N587 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF561Q8N587 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF561Q8N587 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF561Q8N587 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF561Q8N587 LINC00526-201ENST00000581067 1875 ntBASIC18.33■□□□□ 0.53
ZNF561Q8N587 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF561Q8N587 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF561Q8N587 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 UNC93B3-201ENST00000308076 687 ntBASIC18.33■□□□□ 0.52
ZNF561Q8N587 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF561Q8N587 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF561Q8N587 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF561Q8N587 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF561Q8N587 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 AC068587.7-201ENST00000641602 218 ntBASIC18.32■□□□□ 0.52
ZNF561Q8N587 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF561Q8N587 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF561Q8N587 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ZNF561Q8N587 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF561Q8N587 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF561Q8N587 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
ZNF561Q8N587 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF561Q8N587 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF561Q8N587 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF561Q8N587 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF561Q8N587 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF561Q8N587 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF561Q8N587 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF561Q8N587 AC092667.1-201ENST00000434301 2586 ntBASIC18.31■□□□□ 0.52
ZNF561Q8N587 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms