Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX60Q8IY21 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX60Q8IY21 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.04■■□□□ 1.92
DDX60Q8IY21 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
DDX60Q8IY21 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX60Q8IY21 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC27.04■■□□□ 1.92
DDX60Q8IY21 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.04■■□□□ 1.92
DDX60Q8IY21 EMC9-206ENST00000560403 872 ntTSL 2 BASIC27.04■■□□□ 1.92
DDX60Q8IY21 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.04■■□□□ 1.92
DDX60Q8IY21 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
DDX60Q8IY21 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.04■■□□□ 1.92
DDX60Q8IY21 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DDX60Q8IY21 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
DDX60Q8IY21 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.03■■□□□ 1.92
DDX60Q8IY21 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC27.03■■□□□ 1.92
DDX60Q8IY21 AC009237.3-201ENST00000393279 1427 ntBASIC27.03■■□□□ 1.92
DDX60Q8IY21 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
DDX60Q8IY21 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX60Q8IY21 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.02■■□□□ 1.92
DDX60Q8IY21 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC27.02■■□□□ 1.92
DDX60Q8IY21 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.02■■□□□ 1.92
DDX60Q8IY21 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC27.02■■□□□ 1.92
DDX60Q8IY21 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.02■■□□□ 1.92
DDX60Q8IY21 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
DDX60Q8IY21 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX60Q8IY21 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC27.01■■□□□ 1.91
DDX60Q8IY21 UQCRFS1P1-201ENST00000435169 820 ntBASIC27.01■■□□□ 1.91
DDX60Q8IY21 KRT18P11-201ENST00000435214 1283 ntBASIC27.01■■□□□ 1.91
DDX60Q8IY21 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC27.01■■□□□ 1.91
DDX60Q8IY21 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.01■■□□□ 1.91
DDX60Q8IY21 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
DDX60Q8IY21 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.01■■□□□ 1.91
DDX60Q8IY21 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
DDX60Q8IY21 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC27■■□□□ 1.91
DDX60Q8IY21 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX60Q8IY21 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC27■■□□□ 1.91
DDX60Q8IY21 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX60Q8IY21 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC27■■□□□ 1.91
DDX60Q8IY21 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC27■■□□□ 1.91
DDX60Q8IY21 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
DDX60Q8IY21 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC26.99■■□□□ 1.91
DDX60Q8IY21 ESRRAP2-201ENST00000418437 1549 ntBASIC26.99■■□□□ 1.91
DDX60Q8IY21 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.99■■□□□ 1.91
DDX60Q8IY21 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
DDX60Q8IY21 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC26.99■■□□□ 1.91
DDX60Q8IY21 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
DDX60Q8IY21 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC26.99■■□□□ 1.91
DDX60Q8IY21 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.99■■□□□ 1.91
DDX60Q8IY21 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
DDX60Q8IY21 AC055733.4-201ENST00000638462 1354 ntBASIC26.98■■□□□ 1.91
DDX60Q8IY21 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
DDX60Q8IY21 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX60Q8IY21 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.98■■□□□ 1.91
DDX60Q8IY21 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.98■■□□□ 1.91
DDX60Q8IY21 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.98■■□□□ 1.91
DDX60Q8IY21 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC26.98■■□□□ 1.91
DDX60Q8IY21 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
DDX60Q8IY21 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.98■■□□□ 1.91
DDX60Q8IY21 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
DDX60Q8IY21 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
DDX60Q8IY21 MAP2K4P1-201ENST00000438453 1195 ntBASIC26.97■■□□□ 1.91
DDX60Q8IY21 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.97■■□□□ 1.91
DDX60Q8IY21 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC26.97■■□□□ 1.91
DDX60Q8IY21 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC26.97■■□□□ 1.91
DDX60Q8IY21 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.97■■□□□ 1.91
DDX60Q8IY21 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX60Q8IY21 AC079089.2-201ENST00000531211 1277 ntBASIC26.96■■□□□ 1.91
DDX60Q8IY21 DUX4L16-201ENST00000555130 1264 ntBASIC26.96■■□□□ 1.91
DDX60Q8IY21 AC011767.1-201ENST00000617410 1153 ntBASIC26.96■■□□□ 1.91
DDX60Q8IY21 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
DDX60Q8IY21 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX60Q8IY21 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC26.96■■□□□ 1.91
DDX60Q8IY21 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX60Q8IY21 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX60Q8IY21 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
DDX60Q8IY21 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.96■■□□□ 1.91
DDX60Q8IY21 AC006970.2-201ENST00000450065 779 ntBASIC26.96■■□□□ 1.91
DDX60Q8IY21 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.96■■□□□ 1.91
DDX60Q8IY21 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.96■■□□□ 1.91
DDX60Q8IY21 MYCNOS-205ENST00000641950 531 ntBASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms