Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 DUX4L4-201ENST00000566884 1269 ntBASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 MIR4508-201ENST00000584178 70 ntBASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
TRIM42Q8IWZ5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRIM42Q8IWZ5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRIM42Q8IWZ5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRIM42Q8IWZ5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM42Q8IWZ5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM42Q8IWZ5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 AC005703.6-201ENST00000623265 1329 ntBASIC21.49■■□□□ 1.03
TRIM42Q8IWZ5 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 Z98882.1-201ENST00000622160 2253 ntBASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM42Q8IWZ5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms