Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 ECEL1P2-201ENST00000461596 1295 ntBASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CROCCP3Q8IVE0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CROCCP3Q8IVE0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CROCCP3Q8IVE0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CROCCP3Q8IVE0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CROCCP3Q8IVE0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CROCCP3Q8IVE0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CROCCP3Q8IVE0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.58■□□□□ 0.73
CROCCP3Q8IVE0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.58■□□□□ 0.73
CROCCP3Q8IVE0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 ALDH1A3-203ENST00000557963 1670 ntBASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CROCCP3Q8IVE0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 ZNRF2P2-203ENST00000454624 420 ntBASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.57■□□□□ 0.72
CROCCP3Q8IVE0 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.56■□□□□ 0.72
CROCCP3Q8IVE0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms