Protein–RNA interactions for Protein: Q7Z4I7

LIMS2, LIM and senescent cell antigen-like-containing domain protein 2, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2Q7Z4I7 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 OR7E47P-201ENST00000546390 1422 ntBASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
LIMS2Q7Z4I7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIMS2Q7Z4I7 KRT18P14-201ENST00000534205 1250 ntBASIC23.05■■□□□ 1.28
LIMS2Q7Z4I7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.05■■□□□ 1.28
LIMS2Q7Z4I7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.05■■□□□ 1.28
LIMS2Q7Z4I7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
LIMS2Q7Z4I7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
LIMS2Q7Z4I7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 AL162430.1-201ENST00000480705 870 ntBASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.04■■□□□ 1.28
LIMS2Q7Z4I7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 AC009237.3-201ENST00000393279 1427 ntBASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
LIMS2Q7Z4I7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 AC005224.4-201ENST00000583262 1652 ntBASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 AC068473.5-201ENST00000616428 2072 ntBASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.02■■□□□ 1.28
LIMS2Q7Z4I7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.27
LIMS2Q7Z4I7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 AC055733.4-201ENST00000638462 1354 ntBASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LIMS2Q7Z4I7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 KRT18P61-201ENST00000585825 1298 ntBASIC23■■□□□ 1.27
LIMS2Q7Z4I7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LIMS2Q7Z4I7 AC080038.3-201ENST00000623346 1952 ntBASIC23■■□□□ 1.27
LIMS2Q7Z4I7 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LIMS2Q7Z4I7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms