Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTCHD4Q6ZW05 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCHD4Q6ZW05 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCHD4Q6ZW05 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCHD4Q6ZW05 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.86■□□□□ 0.77
PTCHD4Q6ZW05 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PTCHD4Q6ZW05 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PTCHD4Q6ZW05 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
PTCHD4Q6ZW05 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 KRT125P-201ENST00000546827 989 ntBASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 Z92544.1-202ENST00000571933 1220 ntBASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
PTCHD4Q6ZW05 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 MIR4787-201ENST00000607364 84 ntBASIC19.83■□□□□ 0.77
PTCHD4Q6ZW05 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 AC244015.2-201ENST00000616358 1861 ntBASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 FP325331.1-202ENST00000623531 1380 ntBASIC19.83■□□□□ 0.76
PTCHD4Q6ZW05 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTCHD4Q6ZW05 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms