Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 OR7E47P-201ENST00000546390 1422 ntBASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.73■□□□□ 0.59
COLCA1Q6ZS62 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.72■□□□□ 0.59
COLCA1Q6ZS62 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 AL031432.3-201ENST00000607698 485 ntBASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 AL355001.2-201ENST00000620617 1191 ntBASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COLCA1Q6ZS62 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 AP001330.3-201ENST00000520123 633 ntBASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 LINC00565-201ENST00000562710 2331 ntBASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 AC027682.1-201ENST00000562846 899 ntBASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 AL139246.5-201ENST00000606645 996 ntBASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COLCA1Q6ZS62 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 IGHV3-19-201ENST00000521488 291 ntBASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COLCA1Q6ZS62 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 MIR939-201ENST00000401314 82 ntBASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 AC099791.1-201ENST00000416440 715 ntBASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 AC008764.7-201ENST00000593779 1081 ntBASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COLCA1Q6ZS62 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms