Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF111Q6ZNA4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF111Q6ZNA4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RNF111Q6ZNA4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RNF111Q6ZNA4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RNF111Q6ZNA4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF111Q6ZNA4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF111Q6ZNA4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21■□□□□ 0.95
RNF111Q6ZNA4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21■□□□□ 0.95
RNF111Q6ZNA4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF111Q6ZNA4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
RNF111Q6ZNA4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 AC009102.2-201ENST00000606772 1639 ntBASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF111Q6ZNA4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 AC131281.2-201ENST00000520478 145 ntBASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 AL157384.1-201ENST00000445995 2473 ntBASIC20.98■□□□□ 0.95
RNF111Q6ZNA4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 AL512631.2-201ENST00000604634 923 ntBASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF111Q6ZNA4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF111Q6ZNA4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RNF111Q6ZNA4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 AC008406.3-201ENST00000620001 1374 ntBASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF111Q6ZNA4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms