Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZNF549Q6P9A3 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 AC136469.2-201ENST00000623944 1028 ntBASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF549Q6P9A3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 AC011298.3-201ENST00000615796 283 ntBASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF549Q6P9A3 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 CLDN5-201ENST00000403084 2357 ntBASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF549Q6P9A3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF549Q6P9A3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 AC079089.2-201ENST00000531211 1277 ntBASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF549Q6P9A3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 SLC47A1P1-202ENST00000449666 945 ntBASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF549Q6P9A3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
ZNF549Q6P9A3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 UNC93B3-201ENST00000308076 687 ntBASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 AC068587.7-201ENST00000641602 218 ntBASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
ZNF549Q6P9A3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms