Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CDPF1Q6NVV7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDPF1Q6NVV7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
CDPF1Q6NVV7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CDPF1Q6NVV7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 AC005082.1-201ENST00000413042 2259 ntBASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 MIR6089-201ENST00000616698 64 ntBASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CDPF1Q6NVV7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CDPF1Q6NVV7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 AC018445.3-201ENST00000624177 1945 ntBASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 KRT18P60-201ENST00000312876 1297 ntBASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 ATP5G2P3-201ENST00000429083 425 ntBASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CDPF1Q6NVV7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CDPF1Q6NVV7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms