Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRK2Q5S007 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 BX276092.2-201ENST00000417668 665 ntBASIC19.13■□□□□ 0.65
LRRK2Q5S007 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 MIPEPP3-201ENST00000412105 444 ntBASIC19.13■□□□□ 0.65
LRRK2Q5S007 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 UBE2SP1-201ENST00000450587 669 ntBASIC19.13■□□□□ 0.65
LRRK2Q5S007 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.13■□□□□ 0.65
LRRK2Q5S007 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRK2Q5S007 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRK2Q5S007 AC068338.2-201ENST00000563278 1430 ntBASIC19.12■□□□□ 0.65
LRRK2Q5S007 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRK2Q5S007 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRK2Q5S007 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRK2Q5S007 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LRRK2Q5S007 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.12■□□□□ 0.65
LRRK2Q5S007 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRK2Q5S007 AC008694.1-202ENST00000636953 945 ntBASIC19.12■□□□□ 0.65
LRRK2Q5S007 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRK2Q5S007 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRK2Q5S007 AC005224.4-201ENST00000583262 1652 ntBASIC19.11■□□□□ 0.65
LRRK2Q5S007 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRK2Q5S007 AC091874.3-201ENST00000512672 1195 ntBASIC19.11■□□□□ 0.65
LRRK2Q5S007 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 AC016405.3-201ENST00000607710 860 ntBASIC19.11■□□□□ 0.65
LRRK2Q5S007 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRK2Q5S007 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRK2Q5S007 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRK2Q5S007 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
LRRK2Q5S007 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRK2Q5S007 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 KRT18P21-201ENST00000515767 1272 ntBASIC19.1■□□□□ 0.65
LRRK2Q5S007 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRK2Q5S007 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRK2Q5S007 AP003097.1-201ENST00000530657 1135 ntBASIC19.1■□□□□ 0.65
LRRK2Q5S007 BX088651.1-201ENST00000540551 451 ntBASIC19.1■□□□□ 0.65
LRRK2Q5S007 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRK2Q5S007 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRK2Q5S007 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRK2Q5S007 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRK2Q5S007 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRK2Q5S007 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRK2Q5S007 HLA-L-211ENST00000482052 1765 ntBASIC19.09■□□□□ 0.65
LRRK2Q5S007 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRK2Q5S007 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LRRK2Q5S007 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRK2Q5S007 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRRK2Q5S007 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRRK2Q5S007 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
LRRK2Q5S007 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRK2Q5S007 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRK2Q5S007 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRK2Q5S007 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.08■□□□□ 0.65
LRRK2Q5S007 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.08■□□□□ 0.65
LRRK2Q5S007 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRK2Q5S007 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRRK2Q5S007 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRK2Q5S007 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRK2Q5S007 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRK2Q5S007 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRK2Q5S007 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRK2Q5S007 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRK2Q5S007 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.08■□□□□ 0.64
LRRK2Q5S007 AC010141.2-201ENST00000452426 721 ntBASIC19.08■□□□□ 0.64
LRRK2Q5S007 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.08■□□□□ 0.64
LRRK2Q5S007 Z99916.2-201ENST00000604037 246 ntBASIC19.08■□□□□ 0.64
LRRK2Q5S007 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LRRK2Q5S007 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRK2Q5S007 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRK2Q5S007 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRK2Q5S007 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRK2Q5S007 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRK2Q5S007 AC004687.1-201ENST00000579003 1625 ntBASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms