Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TMEM35AQ53FP2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 AF213884.3-201ENST00000563833 479 ntBASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 AL031432.3-201ENST00000607698 485 ntBASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 EP400NL-214ENST00000641289 2402 ntBASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.63■□□□□ 0.89
TMEM35AQ53FP2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 AL136967.2-201ENST00000623968 743 ntBASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TMEM35AQ53FP2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 SUDS3P1-201ENST00000505831 966 ntBASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TMEM35AQ53FP2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEM35AQ53FP2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEM35AQ53FP2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 C11orf96-202ENST00000528572 1834 ntBASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.58■□□□□ 0.89
TMEM35AQ53FP2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
TMEM35AQ53FP2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms