Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PBX2P1-201ENST00000493219 1291 ntBASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 AC106739.1-201ENST00000617035 715 ntBASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.1■□□□□ 0.65
PCGF3Q3KNV8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 MIR638-201ENST00000385237 100 ntBASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 AC009086.3-201ENST00000623486 1008 ntBASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCGF3Q3KNV8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.08■□□□□ 0.65
PCGF3Q3KNV8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 AC139530.1-201ENST00000575312 1977 ntBASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 FBXW4P1-201ENST00000426721 2239 ntBASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCGF3Q3KNV8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCGF3Q3KNV8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 FP325331.1-202ENST00000623531 1380 ntBASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 SLC25A24-204ENST00000569674 2357 ntBASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 AC019069.1-201ENST00000610008 1333 ntBASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 AC011298.3-201ENST00000615796 283 ntBASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCGF3Q3KNV8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PCGF3Q3KNV8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 EDA-201ENST00000338901 1233 ntBASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 SERBP1P1-201ENST00000396021 1160 ntBASIC19.04■□□□□ 0.64
PCGF3Q3KNV8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms