Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFX4Q33E94 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.11■□□□□ 0.81
RFX4Q33E94 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.1■□□□□ 0.81
RFX4Q33E94 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RFX4Q33E94 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFX4Q33E94 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFX4Q33E94 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX4Q33E94 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RFX4Q33E94 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.09■□□□□ 0.81
RFX4Q33E94 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX4Q33E94 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX4Q33E94 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.09■□□□□ 0.81
RFX4Q33E94 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.09■□□□□ 0.81
RFX4Q33E94 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 LINC01529-204ENST00000636474 1715 ntBASIC20.09■□□□□ 0.81
RFX4Q33E94 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFX4Q33E94 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX4Q33E94 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX4Q33E94 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RFX4Q33E94 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RFX4Q33E94 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFX4Q33E94 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX4Q33E94 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.08■□□□□ 0.81
RFX4Q33E94 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
RFX4Q33E94 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFX4Q33E94 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.08■□□□□ 0.81
RFX4Q33E94 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.08■□□□□ 0.81
RFX4Q33E94 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.08■□□□□ 0.8
RFX4Q33E94 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RFX4Q33E94 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX4Q33E94 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX4Q33E94 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX4Q33E94 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFX4Q33E94 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.08■□□□□ 0.8
RFX4Q33E94 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.07■□□□□ 0.8
RFX4Q33E94 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RFX4Q33E94 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.07■□□□□ 0.8
RFX4Q33E94 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFX4Q33E94 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RFX4Q33E94 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 LINC01521-201ENST00000504184 1943 ntBASIC20.06■□□□□ 0.8
RFX4Q33E94 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RFX4Q33E94 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RFX4Q33E94 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.06■□□□□ 0.8
RFX4Q33E94 AL031848.2-201ENST00000607670 837 ntBASIC20.06■□□□□ 0.8
RFX4Q33E94 MIR6722-201ENST00000617286 78 ntBASIC20.06■□□□□ 0.8
RFX4Q33E94 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RFX4Q33E94 Z98882.1-201ENST00000622160 2253 ntBASIC20.06■□□□□ 0.8
RFX4Q33E94 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RFX4Q33E94 FP325331.1-202ENST00000623531 1380 ntBASIC20.06■□□□□ 0.8
RFX4Q33E94 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFX4Q33E94 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RFX4Q33E94 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RFX4Q33E94 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX4Q33E94 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX4Q33E94 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.05■□□□□ 0.8
RFX4Q33E94 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX4Q33E94 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RFX4Q33E94 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX4Q33E94 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFX4Q33E94 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RFX4Q33E94 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFX4Q33E94 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX4Q33E94 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX4Q33E94 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RFX4Q33E94 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RFX4Q33E94 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms