Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 MIR939-201ENST00000401314 82 ntBASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 AC010525.1-201ENST00000585559 441 ntBASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 AC099791.1-201ENST00000416440 715 ntBASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 AC091305.1-201ENST00000479476 895 ntBASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 AC137767.1-201ENST00000602918 1920 ntBASIC19.63■□□□□ 0.73
RASGEF1BQ0VAM2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 RASA4CP-201ENST00000424092 1398 ntBASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 AC126544.1-201ENST00000580842 1059 ntBASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.62■□□□□ 0.73
RASGEF1BQ0VAM2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RASGEF1BQ0VAM2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 CA15P2-201ENST00000611168 834 ntBASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.6■□□□□ 0.73
RASGEF1BQ0VAM2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RASGEF1BQ0VAM2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.73
RASGEF1BQ0VAM2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RASGEF1BQ0VAM2 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.58■□□□□ 0.73
RASGEF1BQ0VAM2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RASGEF1BQ0VAM2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RASGEF1BQ0VAM2 AC019069.1-201ENST00000610008 1333 ntBASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms