Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 NGL3YML118W 1518 nt4.72□□□□□ -1.65
SSL2Q00578 YFL040WYFL040W 1623 nt4.72□□□□□ -1.65
SSL2Q00578 RDI1YDL135C 609 nt4.72□□□□□ -1.65
SSL2Q00578 ATC1YDR184C 885 nt4.72□□□□□ -1.65
SSL2Q00578 LPP1YDR503C 825 nt4.72□□□□□ -1.65
SSL2Q00578 PRP21YJL203W 843 nt4.72□□□□□ -1.65
SSL2Q00578 UPS2YLR168C 693 nt4.72□□□□□ -1.65
SSL2Q00578 GCD7YLR291C 1146 nt4.72□□□□□ -1.65
SSL2Q00578 ECM15YBL001C 315 nt4.72□□□□□ -1.65
SSL2Q00578 HFA1YMR207C 6372 nt4.72□□□□□ -1.65
SSL2Q00578 NPL4YBR170C 1743 nt4.72□□□□□ -1.65
SSL2Q00578 SAC1YKL212W 1872 nt4.71□□□□□ -1.66
SSL2Q00578 YFR045WYFR045W 930 nt4.71□□□□□ -1.66
SSL2Q00578 MPO1YGL010W 525 nt4.71□□□□□ -1.66
SSL2Q00578 YGL117WYGL117W 798 nt4.71□□□□□ -1.66
SSL2Q00578 YIL171WYIL171W 330 nt4.71□□□□□ -1.66
SSL2Q00578 RPL14AYKL006W 417 nt4.71□□□□□ -1.66
SSL2Q00578 CMR3YPR013C 954 nt4.71□□□□□ -1.66
SSL2Q00578 VMA1YDL185W 3216 nt4.71□□□□□ -1.66
SSL2Q00578 REF2YDR195W 1602 nt4.71□□□□□ -1.66
SSL2Q00578 LAS1YKR063C 1509 nt4.71□□□□□ -1.66
SSL2Q00578 MRS2YOR334W 1413 nt4.71□□□□□ -1.66
SSL2Q00578 YNR066CYNR066C 1311 nt4.71□□□□□ -1.66
SSL2Q00578 SRP72YPL210C 1923 nt4.7□□□□□ -1.66
SSL2Q00578 AVT1YJR001W 1809 nt4.7□□□□□ -1.66
SSL2Q00578 YDR179W-AYDR179W-A 1392 nt4.7□□□□□ -1.66
SSL2Q00578 NHP10YDL002C 612 nt4.7□□□□□ -1.66
SSL2Q00578 SPT3YDR392W 1014 nt4.7□□□□□ -1.66
SSL2Q00578 MEI4YER044C-A 1227 nt4.7□□□□□ -1.66
SSL2Q00578 FOL2YGR267C 732 nt4.7□□□□□ -1.66
SSL2Q00578 tR(ACG)JtR(ACG)J 73 nt4.7□□□□□ -1.66
SSL2Q00578 YHR214C-DYHR214C-D 294 nt4.7□□□□□ -1.66
SSL2Q00578 CKA1YIL035C 1119 nt4.7□□□□□ -1.66
SSL2Q00578 CAB2YIL083C 1098 nt4.7□□□□□ -1.66
SSL2Q00578 CPR7YJR032W 1182 nt4.7□□□□□ -1.66
SSL2Q00578 YKL162CYKL162C 1209 nt4.7□□□□□ -1.66
SSL2Q00578 NYV1YLR093C 762 nt4.7□□□□□ -1.66
SSL2Q00578 YAR069CYAR069C 294 nt4.7□□□□□ -1.66
SSL2Q00578 RPS19AYOL121C 435 nt4.7□□□□□ -1.66
SSL2Q00578 YOR364WYOR364W 369 nt4.7□□□□□ -1.66
SSL2Q00578 YPL077CYPL077C 723 nt4.7□□□□□ -1.66
SSL2Q00578 HUT1YPL244C 1020 nt4.7□□□□□ -1.66
SSL2Q00578 ICY2YPL250C 411 nt4.7□□□□□ -1.66
SSL2Q00578 MIH1YMR036C 1665 nt4.7□□□□□ -1.66
SSL2Q00578 YFL012W-AYFL012W-A 375 nt4.69□□□□□ -1.66
SSL2Q00578 YGL204CYGL204C 306 nt4.69□□□□□ -1.66
SSL2Q00578 YGR269WYGR269W 327 nt4.69□□□□□ -1.66
SSL2Q00578 PPX1YHR201C 1194 nt4.69□□□□□ -1.66
SSL2Q00578 MBR1YKL093W 1020 nt4.69□□□□□ -1.66
SSL2Q00578 YNR062CYNR062C 984 nt4.69□□□□□ -1.66
SSL2Q00578 snR11snR11 258 nt4.69□□□□□ -1.66
SSL2Q00578 PHM7YOL084W 2976 nt4.69□□□□□ -1.66
SSL2Q00578 ORC6YHR118C 1308 nt4.69□□□□□ -1.66
SSL2Q00578 NOC2YOR206W 2133 nt4.69□□□□□ -1.66
SSL2Q00578 RKM3YBR030W 1659 nt4.68□□□□□ -1.66
SSL2Q00578 SSB1YDL229W 1842 nt4.68□□□□□ -1.66
SSL2Q00578 YJR061WYJR061W 2808 nt4.68□□□□□ -1.66
SSL2Q00578 PET100YDR079W 336 nt4.68□□□□□ -1.66
SSL2Q00578 YDR274CYDR274C 372 nt4.68□□□□□ -1.66
SSL2Q00578 TLG1YDR468C 675 nt4.68□□□□□ -1.66
SSL2Q00578 ISC10YER180C 804 nt4.68□□□□□ -1.66
SSL2Q00578 YGL193CYGL193C 312 nt4.68□□□□□ -1.66
SSL2Q00578 EFG1YGR271C-A 702 nt4.68□□□□□ -1.66
SSL2Q00578 MFM1YPL060W 1242 nt4.68□□□□□ -1.66
SSL2Q00578 FMP30YPL103C 1407 nt4.68□□□□□ -1.66
SSL2Q00578 SRS2YJL092W 3525 nt4.68□□□□□ -1.66
SSL2Q00578 THI7YLR237W 1797 nt4.68□□□□□ -1.66
SSL2Q00578 SSA2YLL024C 1920 nt4.68□□□□□ -1.66
SSL2Q00578 NAM2YLR382C 2685 nt4.68□□□□□ -1.66
SSL2Q00578 SIP1YDR422C 2448 nt4.67□□□□□ -1.66
SSL2Q00578 TAF8YML114C 1533 nt4.67□□□□□ -1.66
SSL2Q00578 SPO1YNL012W 1896 nt4.67□□□□□ -1.66
SSL2Q00578 MDM38YOL027C 1722 nt4.67□□□□□ -1.66
SSL2Q00578 YEL010WYEL010W 351 nt4.67□□□□□ -1.66
SSL2Q00578 YER067C-AYER067C-A 324 nt4.67□□□□□ -1.66
SSL2Q00578 tR(ACG)Q2tR(ACG)Q2 74 nt4.67□□□□□ -1.66
SSL2Q00578 SDS22YKL193C 1017 nt4.67□□□□□ -1.66
SSL2Q00578 YRA2YKL214C 612 nt4.67□□□□□ -1.66
SSL2Q00578 ATG38YLR211C 681 nt4.67□□□□□ -1.66
SSL2Q00578 ELO3YLR372W 1038 nt4.67□□□□□ -1.66
SSL2Q00578 YMR105W-AYMR105W-A 195 nt4.67□□□□□ -1.66
SSL2Q00578 TOM7YNL070W 183 nt4.67□□□□□ -1.66
SSL2Q00578 NRK1YNL129W 723 nt4.67□□□□□ -1.66
SSL2Q00578 MRPL17YNL252C 846 nt4.67□□□□□ -1.66
SSL2Q00578 PFK27YOL136C 1194 nt4.67□□□□□ -1.66
SSL2Q00578 VPS21YOR089C 633 nt4.67□□□□□ -1.66
SSL2Q00578 PNG1YPL096W 1092 nt4.67□□□□□ -1.66
SSL2Q00578 SUP45YBR143C 1314 nt4.67□□□□□ -1.66
SSL2Q00578 MDM34YGL219C 1380 nt4.66□□□□□ -1.66
SSL2Q00578 PUT2YHR037W 1728 nt4.66□□□□□ -1.66
SSL2Q00578 BI2Q0110 1272 nt4.66□□□□□ -1.66
SSL2Q00578 YFR009W-AYFR009W-A 258 nt4.66□□□□□ -1.66
SSL2Q00578 RPL24AYGL031C 468 nt4.66□□□□□ -1.66
SSL2Q00578 HIS6YIL020C 786 nt4.66□□□□□ -1.66
SSL2Q00578 BAT2YJR148W 1131 nt4.66□□□□□ -1.66
SSL2Q00578 TDA5YLR426W 981 nt4.66□□□□□ -1.66
SSL2Q00578 YMR085WYMR085W 1299 nt4.66□□□□□ -1.66
SSL2Q00578 ATG8YBL078C 354 nt4.66□□□□□ -1.66
SSL2Q00578 RPC34YNR003C 954 nt4.66□□□□□ -1.66
SSL2Q00578 VHS3YOR054C 2025 nt4.66□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 21.7 ms