Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
RAB38P57729 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RAB38P57729 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.42■□□□□ 0.86
RAB38P57729 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB38P57729 AC242852.2-201ENST00000615738 1807 ntBASIC20.41■□□□□ 0.86
RAB38P57729 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB38P57729 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB38P57729 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB38P57729 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAB38P57729 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RAB38P57729 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB38P57729 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB38P57729 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB38P57729 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.41■□□□□ 0.86
RAB38P57729 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.41■□□□□ 0.86
RAB38P57729 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB38P57729 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
RAB38P57729 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB38P57729 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RAB38P57729 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.41■□□□□ 0.86
RAB38P57729 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB38P57729 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB38P57729 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB38P57729 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB38P57729 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.4■□□□□ 0.86
RAB38P57729 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB38P57729 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB38P57729 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.4■□□□□ 0.86
RAB38P57729 AL354811.1-201ENST00000610286 706 ntBASIC20.4■□□□□ 0.86
RAB38P57729 AL358852.1-201ENST00000623174 1268 ntBASIC20.4■□□□□ 0.86
RAB38P57729 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RAB38P57729 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RAB38P57729 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
RAB38P57729 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB38P57729 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.39■□□□□ 0.86
RAB38P57729 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.39■□□□□ 0.86
RAB38P57729 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB38P57729 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.39■□□□□ 0.85
RAB38P57729 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB38P57729 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
RAB38P57729 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
RAB38P57729 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
RAB38P57729 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB38P57729 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RAB38P57729 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RAB38P57729 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.38■□□□□ 0.85
RAB38P57729 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.38■□□□□ 0.85
RAB38P57729 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.38■□□□□ 0.85
RAB38P57729 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RAB38P57729 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RAB38P57729 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB38P57729 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB38P57729 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB38P57729 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB38P57729 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB38P57729 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RAB38P57729 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB38P57729 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RAB38P57729 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RAB38P57729 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.37■□□□□ 0.85
RAB38P57729 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.37■□□□□ 0.85
RAB38P57729 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.36■□□□□ 0.85
RAB38P57729 ECEL1P1-201ENST00000373592 1742 ntBASIC20.36■□□□□ 0.85
RAB38P57729 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB38P57729 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.36■□□□□ 0.85
RAB38P57729 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.36■□□□□ 0.85
RAB38P57729 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.36■□□□□ 0.85
RAB38P57729 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RAB38P57729 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms