Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFERP55789 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.82■□□□□ 0.92
GFERP55789 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.82■□□□□ 0.92
GFERP55789 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFERP55789 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.82■□□□□ 0.92
GFERP55789 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
GFERP55789 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
GFERP55789 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFERP55789 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
GFERP55789 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFERP55789 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.81■□□□□ 0.92
GFERP55789 AC079140.4-201ENST00000507448 529 ntBASIC20.81■□□□□ 0.92
GFERP55789 AC079089.2-201ENST00000531211 1277 ntBASIC20.81■□□□□ 0.92
GFERP55789 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.81■□□□□ 0.92
GFERP55789 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
GFERP55789 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.81■□□□□ 0.92
GFERP55789 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
GFERP55789 AC005224.4-201ENST00000583262 1652 ntBASIC20.8■□□□□ 0.92
GFERP55789 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFERP55789 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GFERP55789 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFERP55789 AC137761.2-201ENST00000561729 223 ntBASIC20.8■□□□□ 0.92
GFERP55789 AC145350.3-201ENST00000569033 163 ntBASIC20.8■□□□□ 0.92
GFERP55789 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.8■□□□□ 0.92
GFERP55789 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.8■□□□□ 0.92
GFERP55789 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
GFERP55789 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFERP55789 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
GFERP55789 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
GFERP55789 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
GFERP55789 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.79■□□□□ 0.92
GFERP55789 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.79■□□□□ 0.92
GFERP55789 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.79■□□□□ 0.92
GFERP55789 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.79■□□□□ 0.92
GFERP55789 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.79■□□□□ 0.92
GFERP55789 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.79■□□□□ 0.92
GFERP55789 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.79■□□□□ 0.92
GFERP55789 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.79■□□□□ 0.92
GFERP55789 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.79■□□□□ 0.92
GFERP55789 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
GFERP55789 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.79■□□□□ 0.92
GFERP55789 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
GFERP55789 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
GFERP55789 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.78■□□□□ 0.92
GFERP55789 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.78■□□□□ 0.92
GFERP55789 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
GFERP55789 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
GFERP55789 AC009237.3-201ENST00000393279 1427 ntBASIC20.78■□□□□ 0.92
GFERP55789 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 DUSP8P5-201ENST00000422884 1815 ntBASIC20.77■□□□□ 0.92
GFERP55789 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 AC016769.1-201ENST00000409132 1010 ntBASIC20.77■□□□□ 0.92
GFERP55789 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
GFERP55789 AC006015.1-201ENST00000429970 570 ntBASIC20.77■□□□□ 0.92
GFERP55789 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GFERP55789 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.77■□□□□ 0.92
GFERP55789 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.77■□□□□ 0.92
GFERP55789 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
GFERP55789 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
GFERP55789 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
GFERP55789 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
GFERP55789 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.76■□□□□ 0.91
GFERP55789 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.76■□□□□ 0.91
GFERP55789 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
GFERP55789 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.76■□□□□ 0.91
GFERP55789 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.76■□□□□ 0.91
GFERP55789 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.76■□□□□ 0.91
GFERP55789 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.76■□□□□ 0.91
GFERP55789 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
GFERP55789 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
GFERP55789 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
GFERP55789 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFERP55789 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.75■□□□□ 0.91
GFERP55789 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
GFERP55789 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
GFERP55789 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
GFERP55789 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.75■□□□□ 0.91
GFERP55789 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.75■□□□□ 0.91
GFERP55789 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.75■□□□□ 0.91
GFERP55789 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.75■□□□□ 0.91
GFERP55789 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.75■□□□□ 0.91
GFERP55789 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.75■□□□□ 0.91
GFERP55789 LINC00526-201ENST00000581067 1875 ntBASIC20.75■□□□□ 0.91
GFERP55789 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms