Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.43■■□□□ 1.02
CLNS1AP54105 TSPY13P-201ENST00000338964 914 ntBASIC21.43■■□□□ 1.02
CLNS1AP54105 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.43■■□□□ 1.02
CLNS1AP54105 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.43■■□□□ 1.02
CLNS1AP54105 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLNS1AP54105 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.43■■□□□ 1.02
CLNS1AP54105 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLNS1AP54105 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLNS1AP54105 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.43■■□□□ 1.02
CLNS1AP54105 AC079630.1-202ENST00000618127 1840 ntBASIC21.43■■□□□ 1.02
CLNS1AP54105 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CLNS1AP54105 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CLNS1AP54105 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLNS1AP54105 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLNS1AP54105 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLNS1AP54105 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CLNS1AP54105 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.42■■□□□ 1.02
CLNS1AP54105 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.42■■□□□ 1.02
CLNS1AP54105 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLNS1AP54105 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLNS1AP54105 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLNS1AP54105 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.42■■□□□ 1.02
CLNS1AP54105 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLNS1AP54105 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLNS1AP54105 AC010980.1-201ENST00000587192 1142 ntBASIC21.41■■□□□ 1.02
CLNS1AP54105 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.41■■□□□ 1.02
CLNS1AP54105 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
CLNS1AP54105 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CLNS1AP54105 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.41■■□□□ 1.02
CLNS1AP54105 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLNS1AP54105 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
CLNS1AP54105 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.4■■□□□ 1.02
CLNS1AP54105 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.4■■□□□ 1.02
CLNS1AP54105 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.4■■□□□ 1.02
CLNS1AP54105 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.4■■□□□ 1.02
CLNS1AP54105 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLNS1AP54105 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLNS1AP54105 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLNS1AP54105 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLNS1AP54105 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLNS1AP54105 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLNS1AP54105 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLNS1AP54105 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CLNS1AP54105 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.39■■□□□ 1.01
CLNS1AP54105 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.39■■□□□ 1.01
CLNS1AP54105 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLNS1AP54105 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.39■■□□□ 1.01
CLNS1AP54105 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLNS1AP54105 ESRRAP2-201ENST00000418437 1549 ntBASIC21.39■■□□□ 1.01
CLNS1AP54105 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLNS1AP54105 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CLNS1AP54105 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.38■■□□□ 1.01
CLNS1AP54105 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.38■■□□□ 1.01
CLNS1AP54105 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.38■■□□□ 1.01
CLNS1AP54105 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.38■■□□□ 1.01
CLNS1AP54105 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.38■■□□□ 1.01
CLNS1AP54105 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CLNS1AP54105 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.38■■□□□ 1.01
CLNS1AP54105 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.38■■□□□ 1.01
CLNS1AP54105 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLNS1AP54105 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
CLNS1AP54105 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CLNS1AP54105 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CLNS1AP54105 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CLNS1AP54105 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 MIR4508-201ENST00000584178 70 ntBASIC21.37■■□□□ 1.01
CLNS1AP54105 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLNS1AP54105 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CLNS1AP54105 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.37■■□□□ 1.01
CLNS1AP54105 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CLNS1AP54105 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CLNS1AP54105 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLNS1AP54105 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLNS1AP54105 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms