Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.64■□□□□ 0.89
GABRA4P48169 AC137767.1-201ENST00000602918 1920 ntBASIC20.64■□□□□ 0.89
GABRA4P48169 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GABRA4P48169 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GABRA4P48169 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
GABRA4P48169 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
GABRA4P48169 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.63■□□□□ 0.89
GABRA4P48169 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.63■□□□□ 0.89
GABRA4P48169 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.63■□□□□ 0.89
GABRA4P48169 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.63■□□□□ 0.89
GABRA4P48169 NTF6G-201ENST00000591094 616 ntBASIC20.63■□□□□ 0.89
GABRA4P48169 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
GABRA4P48169 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GABRA4P48169 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.63■□□□□ 0.89
GABRA4P48169 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.62■□□□□ 0.89
GABRA4P48169 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.62■□□□□ 0.89
GABRA4P48169 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
GABRA4P48169 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.62■□□□□ 0.89
GABRA4P48169 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
GABRA4P48169 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.62■□□□□ 0.89
GABRA4P48169 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
GABRA4P48169 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.62■□□□□ 0.89
GABRA4P48169 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.62■□□□□ 0.89
GABRA4P48169 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GABRA4P48169 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABRA4P48169 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GABRA4P48169 AC005224.4-201ENST00000583262 1652 ntBASIC20.61■□□□□ 0.89
GABRA4P48169 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABRA4P48169 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GABRA4P48169 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.61■□□□□ 0.89
GABRA4P48169 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GABRA4P48169 AC022517.1-201ENST00000592429 346 ntBASIC20.61■□□□□ 0.89
GABRA4P48169 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GABRA4P48169 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.61■□□□□ 0.89
GABRA4P48169 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABRA4P48169 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GABRA4P48169 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GABRA4P48169 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.6■□□□□ 0.89
GABRA4P48169 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.6■□□□□ 0.89
GABRA4P48169 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
GABRA4P48169 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABRA4P48169 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GABRA4P48169 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
GABRA4P48169 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.6■□□□□ 0.89
GABRA4P48169 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.6■□□□□ 0.89
GABRA4P48169 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABRA4P48169 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.6■□□□□ 0.89
GABRA4P48169 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABRA4P48169 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GABRA4P48169 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GABRA4P48169 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
GABRA4P48169 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.6■□□□□ 0.89
GABRA4P48169 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GABRA4P48169 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GABRA4P48169 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.59■□□□□ 0.89
GABRA4P48169 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.59■□□□□ 0.89
GABRA4P48169 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.59■□□□□ 0.89
GABRA4P48169 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
GABRA4P48169 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
GABRA4P48169 AC009237.3-201ENST00000393279 1427 ntBASIC20.59■□□□□ 0.89
GABRA4P48169 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.59■□□□□ 0.89
GABRA4P48169 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GABRA4P48169 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
GABRA4P48169 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
GABRA4P48169 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
GABRA4P48169 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.58■□□□□ 0.89
GABRA4P48169 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.58■□□□□ 0.89
GABRA4P48169 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.58■□□□□ 0.89
GABRA4P48169 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.58■□□□□ 0.89
GABRA4P48169 OR7E47P-201ENST00000546390 1422 ntBASIC20.58■□□□□ 0.88
GABRA4P48169 C9orf163-202ENST00000624034 2573 ntBASIC20.58■□□□□ 0.88
GABRA4P48169 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABRA4P48169 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
GABRA4P48169 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
GABRA4P48169 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.57■□□□□ 0.88
GABRA4P48169 AP004607.4-201ENST00000530158 1459 ntBASIC20.57■□□□□ 0.88
GABRA4P48169 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GABRA4P48169 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.57■□□□□ 0.88
GABRA4P48169 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms