Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 PML39YML107C 1005 nt3.67□□□□□ -1.82
SSN8P47821 RFM1YOR279C 933 nt3.67□□□□□ -1.82
SSN8P47821 BTS1YPL069C 1008 nt3.67□□□□□ -1.82
SSN8P47821 PNG1YPL096W 1092 nt3.67□□□□□ -1.82
SSN8P47821 SWH1YAR042W 3567 nt3.67□□□□□ -1.82
SSN8P47821 YEH2YLR020C 1617 nt3.66□□□□□ -1.82
SSN8P47821 CHD1YER164W 4407 nt3.66□□□□□ -1.82
SSN8P47821 DPH6YLR143W 2058 nt3.66□□□□□ -1.82
SSN8P47821 ROK1YGL171W 1695 nt3.66□□□□□ -1.82
SSN8P47821 YCR075W-AYCR075W-A 228 nt3.66□□□□□ -1.82
SSN8P47821 RDI1YDL135C 609 nt3.66□□□□□ -1.82
SSN8P47821 PLP1YDR183W 693 nt3.66□□□□□ -1.82
SSN8P47821 HIM1YDR317W 1245 nt3.66□□□□□ -1.82
SSN8P47821 PCL7YIL050W 858 nt3.66□□□□□ -1.82
SSN8P47821 ARC15YIL062C 465 nt3.66□□□□□ -1.82
SSN8P47821 tX(XXX)DtX(XXX)D 100 nt3.66□□□□□ -1.82
SSN8P47821 RSM26YJR101W 801 nt3.66□□□□□ -1.82
SSN8P47821 YLR407WYLR407W 687 nt3.66□□□□□ -1.82
SSN8P47821 SSU72YNL222W 621 nt3.66□□□□□ -1.82
SSN8P47821 UTP23YOR004W 765 nt3.66□□□□□ -1.82
SSN8P47821 YOR114WYOR114W 885 nt3.66□□□□□ -1.82
SSN8P47821 RPS9BYBR189W 588 nt3.66□□□□□ -1.82
SSN8P47821 YBR292CYBR292C 372 nt3.66□□□□□ -1.82
SSN8P47821 SPT16YGL207W 3108 nt3.66□□□□□ -1.82
SSN8P47821 ALO1YML086C 1581 nt3.66□□□□□ -1.82
SSN8P47821 APL4YPR029C 2499 nt3.66□□□□□ -1.82
SSN8P47821 PST1YDR055W 1335 nt3.66□□□□□ -1.82
SSN8P47821 SAF1YBR280C 1914 nt3.66□□□□□ -1.82
SSN8P47821 ERB1YMR049C 2424 nt3.65□□□□□ -1.82
SSN8P47821 RPN4YDL020C 1596 nt3.65□□□□□ -1.82
SSN8P47821 SPT4YGR063C 309 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)CtQ(UUG)C 72 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)D1tQ(UUG)D1 72 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)D2tQ(UUG)D2 72 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)D3tQ(UUG)D3 72 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)E1tQ(UUG)E1 72 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)HtQ(UUG)H 72 nt3.65□□□□□ -1.83
SSN8P47821 tQ(UUG)LtQ(UUG)L 72 nt3.65□□□□□ -1.83
SSN8P47821 YHR214C-EYHR214C-E 300 nt3.65□□□□□ -1.83
SSN8P47821 RPB3YIL021W 957 nt3.65□□□□□ -1.83
SSN8P47821 POL32YJR043C 1053 nt3.65□□□□□ -1.83
SSN8P47821 YAR070CYAR070C 300 nt3.65□□□□□ -1.83
SSN8P47821 YLR428CYLR428C 345 nt3.65□□□□□ -1.83
SSN8P47821 RRG9YNL213C 645 nt3.65□□□□□ -1.83
SSN8P47821 ECM8YBR076W 1065 nt3.65□□□□□ -1.83
SSN8P47821 APE2YKL157W 2859 nt3.65□□□□□ -1.83
SSN8P47821 AVT7YIL088C 1473 nt3.65□□□□□ -1.83
SSN8P47821 LAS1YKR063C 1509 nt3.65□□□□□ -1.83
SSN8P47821 SIP1YDR422C 2448 nt3.64□□□□□ -1.83
SSN8P47821 BYE1YKL005C 1785 nt3.64□□□□□ -1.83
SSN8P47821 RPL24AYGL031C 468 nt3.64□□□□□ -1.83
SSN8P47821 GEP7YGL057C 864 nt3.64□□□□□ -1.83
SSN8P47821 PEX14YGL153W 1026 nt3.64□□□□□ -1.83
SSN8P47821 YHL026CYHL026C 948 nt3.64□□□□□ -1.83
SSN8P47821 AIR1YIL079C 1083 nt3.64□□□□□ -1.83
SSN8P47821 FMC1YIL098C 468 nt3.64□□□□□ -1.83
SSN8P47821 AIM22YJL046W 1230 nt3.64□□□□□ -1.83
SSN8P47821 RPP0YLR340W 939 nt3.64□□□□□ -1.83
SSN8P47821 YLR365WYLR365W 333 nt3.64□□□□□ -1.83
SSN8P47821 RPS19AYOL121C 435 nt3.64□□□□□ -1.83
SSN8P47821 PFK27YOL136C 1194 nt3.64□□□□□ -1.83
SSN8P47821 SNF8YPL002C 702 nt3.64□□□□□ -1.83
SSN8P47821 OPY1YBR129C 987 nt3.64□□□□□ -1.83
SSN8P47821 ARA1YBR149W 1035 nt3.64□□□□□ -1.83
SSN8P47821 GCR1YPL075W 2358 nt3.64□□□□□ -1.83
SSN8P47821 SEA4YBL104C 3117 nt3.64□□□□□ -1.83
SSN8P47821 CEG1YGL130W 1380 nt3.63□□□□□ -1.83
SSN8P47821 KAP95YLR347C 2586 nt3.63□□□□□ -1.83
SSN8P47821 URC2YDR520C 2319 nt3.63□□□□□ -1.83
SSN8P47821 YCR007CYCR007C 720 nt3.63□□□□□ -1.83
SSN8P47821 NOP6YDL213C 678 nt3.63□□□□□ -1.83
SSN8P47821 YFR032C-BYFR032C-B 264 nt3.63□□□□□ -1.83
SSN8P47821 COS8YHL048W 1146 nt3.63□□□□□ -1.83
SSN8P47821 CUP1-1YHR053C 186 nt3.63□□□□□ -1.83
SSN8P47821 CUP1-2YHR055C 186 nt3.63□□□□□ -1.83
SSN8P47821 BNA1YJR025C 534 nt3.63□□□□□ -1.83
SSN8P47821 FMP46YKR049C 402 nt3.63□□□□□ -1.83
SSN8P47821 SEC72YLR292C 582 nt3.63□□□□□ -1.83
SSN8P47821 ARG80YMR042W 534 nt3.63□□□□□ -1.83
SSN8P47821 RRN9YMR270C 1098 nt3.63□□□□□ -1.83
SSN8P47821 PSF3YOL146W 585 nt3.63□□□□□ -1.83
SSN8P47821 FSH3YOR280C 801 nt3.63□□□□□ -1.83
SSN8P47821 YPL278CYPL278C 303 nt3.63□□□□□ -1.83
SSN8P47821 APA1YCL050C 966 nt3.63□□□□□ -1.83
SSN8P47821 ELM1YKL048C 1923 nt3.63□□□□□ -1.83
SSN8P47821 YNR066CYNR066C 1311 nt3.63□□□□□ -1.83
SSN8P47821 NSP1YJL041W 2472 nt3.63□□□□□ -1.83
SSN8P47821 CLG1YGL215W 1359 nt3.63□□□□□ -1.83
SSN8P47821 PHM7YOL084W 2976 nt3.62□□□□□ -1.83
SSN8P47821 YDL094CYDL094C 510 nt3.62□□□□□ -1.83
SSN8P47821 YGR126WYGR126W 693 nt3.62□□□□□ -1.83
SSN8P47821 COX3Q0275 810 nt3.62□□□□□ -1.83
SSN8P47821 CMC1YKL137W 336 nt3.62□□□□□ -1.83
SSN8P47821 YAL064WYAL064W 285 nt3.62□□□□□ -1.83
SSN8P47821 PER33YLR064W 822 nt3.62□□□□□ -1.83
SSN8P47821 YLR366WYLR366W 306 nt3.62□□□□□ -1.83
SSN8P47821 YML094C-AYML094C-A 402 nt3.62□□□□□ -1.83
SSN8P47821 EOS1YNL080C 1101 nt3.62□□□□□ -1.83
SSN8P47821 PLP2YOR281C 861 nt3.62□□□□□ -1.83
SSN8P47821 TAF3YPL011C 1062 nt3.62□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms