Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SLC1A2P43004 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
SLC1A2P43004 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SLC1A2P43004 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC1A2P43004 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC1A2P43004 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC1A2P43004 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.64■■□□□ 1.05
SLC1A2P43004 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A2P43004 AC007375.3-201ENST00000600936 2314 ntBASIC21.64■■□□□ 1.05
SLC1A2P43004 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A2P43004 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC1A2P43004 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SLC1A2P43004 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SLC1A2P43004 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
SLC1A2P43004 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC1A2P43004 FAM99A-202ENST00000538190 1989 ntBASIC21.62■■□□□ 1.05
SLC1A2P43004 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.62■■□□□ 1.05
SLC1A2P43004 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.62■■□□□ 1.05
SLC1A2P43004 AC079089.2-201ENST00000531211 1277 ntBASIC21.62■■□□□ 1.05
SLC1A2P43004 AL138724.1-201ENST00000606771 1088 ntBASIC21.62■■□□□ 1.05
SLC1A2P43004 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
SLC1A2P43004 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SLC1A2P43004 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SLC1A2P43004 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.61■■□□□ 1.05
SLC1A2P43004 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
SLC1A2P43004 DUX4L19-201ENST00000557448 1267 ntBASIC21.61■■□□□ 1.05
SLC1A2P43004 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC1A2P43004 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SLC1A2P43004 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.61■■□□□ 1.05
SLC1A2P43004 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.61■■□□□ 1.05
SLC1A2P43004 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
SLC1A2P43004 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
SLC1A2P43004 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC1A2P43004 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.6■■□□□ 1.05
SLC1A2P43004 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC1A2P43004 AC068587.7-201ENST00000641602 218 ntBASIC21.6■■□□□ 1.05
SLC1A2P43004 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SLC1A2P43004 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.6■■□□□ 1.05
SLC1A2P43004 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.59■■□□□ 1.05
SLC1A2P43004 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC1A2P43004 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SLC1A2P43004 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC1A2P43004 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SLC1A2P43004 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A2P43004 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.59■■□□□ 1.05
SLC1A2P43004 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
SLC1A2P43004 AC136469.2-201ENST00000623944 1028 ntBASIC21.59■■□□□ 1.05
SLC1A2P43004 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SLC1A2P43004 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SLC1A2P43004 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.58■■□□□ 1.05
SLC1A2P43004 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
SLC1A2P43004 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 AL136116.3-201ENST00000402907 1138 ntBASIC21.58■■□□□ 1.05
SLC1A2P43004 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.58■■□□□ 1.05
SLC1A2P43004 AC011298.3-201ENST00000615796 283 ntBASIC21.58■■□□□ 1.05
SLC1A2P43004 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SLC1A2P43004 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.58■■□□□ 1.05
SLC1A2P43004 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SLC1A2P43004 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC1A2P43004 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SLC1A2P43004 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.57■■□□□ 1.04
SLC1A2P43004 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC1A2P43004 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.57■■□□□ 1.04
SLC1A2P43004 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SLC1A2P43004 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms