Protein–RNA interactions for Protein: P39748

FEN1, Flap endonuclease 1, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FEN1P39748 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FEN1P39748 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FEN1P39748 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FEN1P39748 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.59■□□□□ 0.89
FEN1P39748 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FEN1P39748 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
FEN1P39748 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
FEN1P39748 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.58■□□□□ 0.89
FEN1P39748 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FEN1P39748 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
FEN1P39748 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.58■□□□□ 0.89
FEN1P39748 AC010525.1-201ENST00000585559 441 ntBASIC20.58■□□□□ 0.89
FEN1P39748 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.58■□□□□ 0.89
FEN1P39748 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
FEN1P39748 AC136469.2-201ENST00000623944 1028 ntBASIC20.58■□□□□ 0.89
FEN1P39748 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FEN1P39748 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FEN1P39748 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FEN1P39748 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.58■□□□□ 0.88
FEN1P39748 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
FEN1P39748 AC242852.2-201ENST00000615738 1807 ntBASIC20.57■□□□□ 0.88
FEN1P39748 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
FEN1P39748 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FEN1P39748 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FEN1P39748 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FEN1P39748 AC096631.2-201ENST00000436136 790 ntBASIC20.57■□□□□ 0.88
FEN1P39748 OR2I1P-207ENST00000453522 948 ntBASIC20.57■□□□□ 0.88
FEN1P39748 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.57■□□□□ 0.88
FEN1P39748 LINC00526-201ENST00000581067 1875 ntBASIC20.57■□□□□ 0.88
FEN1P39748 AL136162.1-201ENST00000607711 1078 ntBASIC20.57■□□□□ 0.88
FEN1P39748 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FEN1P39748 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.57■□□□□ 0.88
FEN1P39748 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
FEN1P39748 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FEN1P39748 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FEN1P39748 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
FEN1P39748 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.56■□□□□ 0.88
FEN1P39748 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.56■□□□□ 0.88
FEN1P39748 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.56■□□□□ 0.88
FEN1P39748 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.56■□□□□ 0.88
FEN1P39748 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FEN1P39748 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FEN1P39748 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FEN1P39748 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 AC024257.2-201ENST00000549699 147 ntBASIC20.55■□□□□ 0.88
FEN1P39748 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FEN1P39748 ECEL1P1-201ENST00000373592 1742 ntBASIC20.55■□□□□ 0.88
FEN1P39748 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FEN1P39748 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FEN1P39748 AC137767.1-201ENST00000602918 1920 ntBASIC20.55■□□□□ 0.88
FEN1P39748 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
FEN1P39748 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 AL031602.1-201ENST00000633169 911 ntBASIC20.54■□□□□ 0.88
FEN1P39748 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.54■□□□□ 0.88
FEN1P39748 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FEN1P39748 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FEN1P39748 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 MIR4767-201ENST00000582827 78 ntBASIC20.53■□□□□ 0.88
FEN1P39748 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.53■□□□□ 0.88
FEN1P39748 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.53■□□□□ 0.88
FEN1P39748 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
FEN1P39748 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
FEN1P39748 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FEN1P39748 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.52■□□□□ 0.88
FEN1P39748 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms