Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CPS1P31327 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
CPS1P31327 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
CPS1P31327 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CPS1P31327 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
CPS1P31327 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC31.1■■■□□ 2.57
CPS1P31327 UNC93B4-201ENST00000505679 747 ntBASIC31.09■■■□□ 2.57
CPS1P31327 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CPS1P31327 AC092118.2-201ENST00000613495 667 ntBASIC31.09■■■□□ 2.57
CPS1P31327 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.09■■■□□ 2.57
CPS1P31327 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.09■■■□□ 2.57
CPS1P31327 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CPS1P31327 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.09■■■□□ 2.57
CPS1P31327 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC31.09■■■□□ 2.57
CPS1P31327 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC31.08■■■□□ 2.57
CPS1P31327 MIPEPP3-201ENST00000412105 444 ntBASIC31.08■■■□□ 2.57
CPS1P31327 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
CPS1P31327 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC31.08■■■□□ 2.57
CPS1P31327 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CPS1P31327 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
CPS1P31327 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
CPS1P31327 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC31.08■■■□□ 2.57
CPS1P31327 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CPS1P31327 AC083880.1-201ENST00000608266 535 ntBASIC31.08■■■□□ 2.57
CPS1P31327 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.07■■■□□ 2.56
CPS1P31327 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.07■■■□□ 2.56
CPS1P31327 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 AC079630.1-202ENST00000618127 1840 ntBASIC31.07■■■□□ 2.56
CPS1P31327 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC31.07■■■□□ 2.56
CPS1P31327 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 ESRRAP1-201ENST00000400596 1257 ntBASIC31.07■■■□□ 2.56
CPS1P31327 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC31.07■■■□□ 2.56
CPS1P31327 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CPS1P31327 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CPS1P31327 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CPS1P31327 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
CPS1P31327 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
CPS1P31327 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CPS1P31327 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.06■■■□□ 2.56
CPS1P31327 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
CPS1P31327 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC31.06■■■□□ 2.56
CPS1P31327 USP36-216ENST00000589424 970 ntTSL 5 BASIC31.06■■■□□ 2.56
CPS1P31327 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.06■■■□□ 2.56
CPS1P31327 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC31.06■■■□□ 2.56
CPS1P31327 AC068587.7-201ENST00000641602 218 ntBASIC31.06■■■□□ 2.56
CPS1P31327 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC31.06■■■□□ 2.56
CPS1P31327 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
CPS1P31327 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CPS1P31327 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CPS1P31327 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC31.05■■■□□ 2.56
CPS1P31327 CYP2T1P-201ENST00000432607 1285 ntBASIC31.05■■■□□ 2.56
CPS1P31327 FAM210CP-201ENST00000445714 574 ntBASIC31.05■■■□□ 2.56
CPS1P31327 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC31.05■■■□□ 2.56
CPS1P31327 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CPS1P31327 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.05■■■□□ 2.56
CPS1P31327 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CPS1P31327 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CPS1P31327 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CPS1P31327 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CPS1P31327 AC010331.1-201ENST00000611423 582 ntBASIC31.04■■■□□ 2.56
CPS1P31327 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
CPS1P31327 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CPS1P31327 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
CPS1P31327 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC31.03■■■□□ 2.56
CPS1P31327 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC31.03■■■□□ 2.56
CPS1P31327 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CPS1P31327 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CPS1P31327 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
CPS1P31327 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CPS1P31327 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CPS1P31327 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31.03■■■□□ 2.56
CPS1P31327 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CPS1P31327 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CPS1P31327 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CPS1P31327 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CPS1P31327 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CPS1P31327 MKRN4P-201ENST00000444706 1521 ntBASIC31.02■■■□□ 2.56
CPS1P31327 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CPS1P31327 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC31.02■■■□□ 2.56
CPS1P31327 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
CPS1P31327 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.56
CPS1P31327 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.01■■■□□ 2.56
CPS1P31327 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CPS1P31327 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.56
CPS1P31327 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CPS1P31327 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
CPS1P31327 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
CPS1P31327 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.01■■■□□ 2.55
CPS1P31327 AC006058.3-201ENST00000606217 1069 ntBASIC31.01■■■□□ 2.55
CPS1P31327 MMD2-204ENST00000612910 778 ntTSL 5 BASIC31.01■■■□□ 2.55
CPS1P31327 AC010536.3-201ENST00000620306 533 ntBASIC31.01■■■□□ 2.55
CPS1P31327 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CPS1P31327 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
CPS1P31327 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CPS1P31327 AC004687.1-201ENST00000579003 1625 ntBASIC31■■■□□ 2.55
CPS1P31327 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms