Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 LINC01971-201ENST00000617888 1048 ntBASIC20.61■□□□□ 0.89
CALRP27797 DUX4L22-201ENST00000618238 1269 ntBASIC20.61■□□□□ 0.89
CALRP27797 DUX4L20-201ENST00000619712 1269 ntBASIC20.61■□□□□ 0.89
CALRP27797 DUX4L21-201ENST00000622058 1269 ntBASIC20.61■□□□□ 0.89
CALRP27797 DUX4L10-201ENST00000622460 1267 ntBASIC20.61■□□□□ 0.89
CALRP27797 DUX4L25-201ENST00000624915 1269 ntBASIC20.61■□□□□ 0.89
CALRP27797 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALRP27797 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CALRP27797 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CALRP27797 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALRP27797 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CALRP27797 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CALRP27797 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.61■□□□□ 0.89
CALRP27797 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.6■□□□□ 0.89
CALRP27797 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CALRP27797 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CALRP27797 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.59■□□□□ 0.89
CALRP27797 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.59■□□□□ 0.89
CALRP27797 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CALRP27797 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 FER1L4-210ENST00000615531 5998 ntBASIC20.59■□□□□ 0.89
CALRP27797 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CALRP27797 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CALRP27797 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.59■□□□□ 0.89
CALRP27797 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.59■□□□□ 0.89
CALRP27797 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CALRP27797 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CALRP27797 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALRP27797 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALRP27797 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CALRP27797 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CALRP27797 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CALRP27797 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.58■□□□□ 0.89
CALRP27797 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CALRP27797 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.58■□□□□ 0.89
CALRP27797 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CALRP27797 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALRP27797 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.58■□□□□ 0.88
CALRP27797 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALRP27797 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CALRP27797 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.58■□□□□ 0.88
CALRP27797 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CALRP27797 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.57■□□□□ 0.88
CALRP27797 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CALRP27797 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CALRP27797 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.56■□□□□ 0.88
CALRP27797 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 FBXW4P1-201ENST00000426721 2239 ntBASIC20.56■□□□□ 0.88
CALRP27797 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.56■□□□□ 0.88
CALRP27797 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
CALRP27797 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.56■□□□□ 0.88
CALRP27797 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.56■□□□□ 0.88
CALRP27797 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CALRP27797 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALRP27797 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
CALRP27797 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALRP27797 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALRP27797 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CALRP27797 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.55■□□□□ 0.88
CALRP27797 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CALRP27797 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.55■□□□□ 0.88
CALRP27797 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms