Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RPS4Y1P22090 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPS4Y1P22090 FAM99A-202ENST00000538190 1989 ntBASIC19.95■□□□□ 0.78
RPS4Y1P22090 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPS4Y1P22090 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RPS4Y1P22090 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.94■□□□□ 0.78
RPS4Y1P22090 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.94■□□□□ 0.78
RPS4Y1P22090 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RPS4Y1P22090 SLC47A1P1-202ENST00000449666 945 ntBASIC19.94■□□□□ 0.78
RPS4Y1P22090 AC087239.1-201ENST00000622671 572 ntBASIC19.94■□□□□ 0.78
RPS4Y1P22090 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RPS4Y1P22090 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.94■□□□□ 0.78
RPS4Y1P22090 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPS4Y1P22090 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RPS4Y1P22090 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPS4Y1P22090 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.92■□□□□ 0.78
RPS4Y1P22090 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RPS4Y1P22090 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.92■□□□□ 0.78
RPS4Y1P22090 FBXW4P1-201ENST00000426721 2239 ntBASIC19.92■□□□□ 0.78
RPS4Y1P22090 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 OR7E47P-201ENST00000546390 1422 ntBASIC19.92■□□□□ 0.78
RPS4Y1P22090 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPS4Y1P22090 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RPS4Y1P22090 OXCT2P1-201ENST00000447263 1535 ntBASIC19.92■□□□□ 0.78
RPS4Y1P22090 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
RPS4Y1P22090 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y1P22090 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPS4Y1P22090 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.91■□□□□ 0.78
RPS4Y1P22090 AP005435.1-201ENST00000529293 1178 ntBASIC19.91■□□□□ 0.78
RPS4Y1P22090 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.91■□□□□ 0.78
RPS4Y1P22090 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RPS4Y1P22090 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y1P22090 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y1P22090 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y1P22090 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.9■□□□□ 0.78
RPS4Y1P22090 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.9■□□□□ 0.78
RPS4Y1P22090 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RPS4Y1P22090 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RPS4Y1P22090 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.89■□□□□ 0.78
RPS4Y1P22090 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y1P22090 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RPS4Y1P22090 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y1P22090 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y1P22090 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.89■□□□□ 0.77
RPS4Y1P22090 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.89■□□□□ 0.77
RPS4Y1P22090 AC131212.1-201ENST00000613771 668 ntBASIC19.89■□□□□ 0.77
RPS4Y1P22090 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RPS4Y1P22090 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RPS4Y1P22090 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RPS4Y1P22090 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms