Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ATF3P18847 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ATF3P18847 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ATF3P18847 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ATF3P18847 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC30.24■■■□□ 2.43
ATF3P18847 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ATF3P18847 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.24■■■□□ 2.43
ATF3P18847 KRT18P20-201ENST00000548986 1279 ntBASIC30.24■■■□□ 2.43
ATF3P18847 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
ATF3P18847 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
ATF3P18847 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATF3P18847 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.23■■■□□ 2.43
ATF3P18847 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.23■■■□□ 2.43
ATF3P18847 CYP2T1P-201ENST00000432607 1285 ntBASIC30.23■■■□□ 2.43
ATF3P18847 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.23■■■□□ 2.43
ATF3P18847 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.23■■■□□ 2.43
ATF3P18847 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
ATF3P18847 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
ATF3P18847 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC30.22■■■□□ 2.43
ATF3P18847 BMP1-204ENST00000397814 836 ntTSL 4 BASIC30.22■■■□□ 2.43
ATF3P18847 ESRRAP1-201ENST00000400596 1257 ntBASIC30.22■■■□□ 2.43
ATF3P18847 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30.22■■■□□ 2.43
ATF3P18847 AC092118.2-201ENST00000613495 667 ntBASIC30.22■■■□□ 2.43
ATF3P18847 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.22■■■□□ 2.43
ATF3P18847 AC079630.1-202ENST00000618127 1840 ntBASIC30.22■■■□□ 2.43
ATF3P18847 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
ATF3P18847 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ATF3P18847 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ATF3P18847 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.21■■■□□ 2.43
ATF3P18847 AL158047.1-201ENST00000445918 881 ntBASIC30.21■■■□□ 2.43
ATF3P18847 AC010141.2-201ENST00000452426 721 ntBASIC30.21■■■□□ 2.43
ATF3P18847 RPS2P4-201ENST00000476944 856 ntBASIC30.21■■■□□ 2.43
ATF3P18847 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.21■■■□□ 2.43
ATF3P18847 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC30.21■■■□□ 2.43
ATF3P18847 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.21■■■□□ 2.43
ATF3P18847 AC068338.2-201ENST00000563278 1430 ntBASIC30.21■■■□□ 2.43
ATF3P18847 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
ATF3P18847 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
ATF3P18847 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC30.2■■■□□ 2.43
ATF3P18847 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
ATF3P18847 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
ATF3P18847 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.2■■■□□ 2.43
ATF3P18847 UQCRFS1P1-201ENST00000435169 820 ntBASIC30.2■■■□□ 2.43
ATF3P18847 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
ATF3P18847 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
ATF3P18847 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ATF3P18847 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.19■■■□□ 2.42
ATF3P18847 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC30.19■■■□□ 2.42
ATF3P18847 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC30.19■■■□□ 2.42
ATF3P18847 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
ATF3P18847 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.19■■■□□ 2.42
ATF3P18847 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC30.19■■■□□ 2.42
ATF3P18847 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
ATF3P18847 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
ATF3P18847 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
ATF3P18847 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATF3P18847 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.18■■■□□ 2.42
ATF3P18847 TERF1P5-201ENST00000477545 1207 ntBASIC30.18■■■□□ 2.42
ATF3P18847 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC30.18■■■□□ 2.42
ATF3P18847 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.18■■■□□ 2.42
ATF3P18847 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATF3P18847 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
ATF3P18847 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 AC022211.4-201ENST00000625094 2161 ntBASIC30.17■■■□□ 2.42
ATF3P18847 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.17■■■□□ 2.42
ATF3P18847 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
ATF3P18847 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC30.17■■■□□ 2.42
ATF3P18847 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ATF3P18847 AC138907.5-202ENST00000569484 235 ntBASIC30.17■■■□□ 2.42
ATF3P18847 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC30.17■■■□□ 2.42
ATF3P18847 OR10C1-204ENST00000622521 1039 ntBASIC30.17■■■□□ 2.42
ATF3P18847 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
ATF3P18847 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
ATF3P18847 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ATF3P18847 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC30.16■■■□□ 2.42
ATF3P18847 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ATF3P18847 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.16■■■□□ 2.42
ATF3P18847 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.16■■■□□ 2.42
ATF3P18847 AC142381.4-202ENST00000563973 229 ntBASIC30.16■■■□□ 2.42
ATF3P18847 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.16■■■□□ 2.42
ATF3P18847 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ATF3P18847 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ATF3P18847 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
ATF3P18847 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
ATF3P18847 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC30.15■■■□□ 2.42
ATF3P18847 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.15■■■□□ 2.42
ATF3P18847 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.15■■■□□ 2.42
ATF3P18847 AC083880.1-201ENST00000608266 535 ntBASIC30.15■■■□□ 2.42
ATF3P18847 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.15■■■□□ 2.42
ATF3P18847 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ATF3P18847 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
ATF3P18847 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
ATF3P18847 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.14■■■□□ 2.42
ATF3P18847 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms