Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 RTT103YDR289C 1230 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 YAL037WYAL037W 804 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 YLR036CYLR036C 612 nt4.17□□□□□ -1.74
TY2B-LR1P0C2J3 KIP1YBL063W 3336 nt4.16□□□□□ -1.74
TY2B-LR1P0C2J3 SRC1YML034W 2505 nt4.16□□□□□ -1.74
TY2B-LR1P0C2J3 YLR152CYLR152C 1731 nt4.16□□□□□ -1.74
TY2B-LR1P0C2J3 SDH3YKL141W 597 nt4.16□□□□□ -1.74
TY2B-LR1P0C2J3 YLR177WYLR177W 1887 nt4.15□□□□□ -1.74
TY2B-LR1P0C2J3 APL6YGR261C 2430 nt4.15□□□□□ -1.75
TY2B-LR1P0C2J3 GCD6YDR211W 2139 nt4.15□□□□□ -1.75
TY2B-LR1P0C2J3 YHR213WYHR213W 597 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 PHD1YKL043W 1101 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 YAR062WYAR062W 597 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 YML119WYML119W 1074 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 HPC2YBR215W 1878 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 TDA11YHR159W 1515 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 YKL169CYKL169C 384 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 YNL108CYNL108C 813 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 PEP1YBL017C 4740 nt4.14□□□□□ -1.75
TY2B-LR1P0C2J3 BEM4YPL161C 1902 nt4.13□□□□□ -1.75
TY2B-LR1P0C2J3 FCF1YDR339C 570 nt4.13□□□□□ -1.75
TY2B-LR1P0C2J3 KRI1YNL308C 1776 nt4.13□□□□□ -1.75
TY2B-LR1P0C2J3 RBA50YDR527W 1320 nt4.13□□□□□ -1.75
TY2B-LR1P0C2J3 YCR101CYCR101C 549 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 PAU14YIL176C 363 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 PAU1YJL223C 363 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 LAC1YKL008C 1257 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 SEC17YBL050W 879 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 YOR050CYOR050C 348 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 SSY1YDR160W 2559 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 AUS1YOR011W 4185 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 TYR1YBR166C 1359 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 GRX6YDL010W 696 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 YMR082CYMR082C 357 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 FMP41YNL168C 780 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 LDS2YOL047C 1071 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 YBR141W-AYBR141W-A 96 nt4.12□□□□□ -1.75
TY2B-LR1P0C2J3 YIL163CYIL163C 354 nt4.11□□□□□ -1.75
TY2B-LR1P0C2J3 YLR255CYLR255C 354 nt4.11□□□□□ -1.75
TY2B-LR1P0C2J3 DGK1YOR311C 873 nt4.11□□□□□ -1.75
TY2B-LR1P0C2J3 SSQ1YLR369W 1974 nt4.11□□□□□ -1.75
TY2B-LR1P0C2J3 FUN12YAL035W 3009 nt4.11□□□□□ -1.75
TY2B-LR1P0C2J3 DAP2YHR028C 2457 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 CDC6YJL194W 1542 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 MAF1YDR005C 1188 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 PRE2YPR103W 864 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 YLR352WYLR352W 2424 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 RGR1YLR071C 3249 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 FRE1YLR214W 2061 nt4.1□□□□□ -1.75
TY2B-LR1P0C2J3 PTR2YKR093W 1806 nt4.09□□□□□ -1.75
TY2B-LR1P0C2J3 YDL124WYDL124W 939 nt4.09□□□□□ -1.75
TY2B-LR1P0C2J3 VTC1YER072W 390 nt4.09□□□□□ -1.75
TY2B-LR1P0C2J3 BCK1YJL095W 4437 nt4.09□□□□□ -1.75
TY2B-LR1P0C2J3 RBL2YOR265W 321 nt4.09□□□□□ -1.76
TY2B-LR1P0C2J3 RPL33AYPL143W 324 nt4.09□□□□□ -1.76
TY2B-LR1P0C2J3 RIB5YBR256C 717 nt4.09□□□□□ -1.76
TY2B-LR1P0C2J3 TRE2YOR256C 2430 nt4.09□□□□□ -1.76
TY2B-LR1P0C2J3 SEN1YLR430W 6696 nt4.09□□□□□ -1.76
TY2B-LR1P0C2J3 RIM4YHL024W 2142 nt4.08□□□□□ -1.76
TY2B-LR1P0C2J3 RNT1YMR239C 1416 nt4.08□□□□□ -1.76
TY2B-LR1P0C2J3 YLL017WYLL017W 312 nt4.08□□□□□ -1.76
TY2B-LR1P0C2J3 SFH5YJL145W 885 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 URK1YNR012W 1506 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 SPO71YDR104C 3738 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 PMR1YGL167C 2853 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 YKR033CYKR033C 426 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 MIC27YNL100W 705 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 YPL039WYPL039W 951 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 MRPL37YBR268W 318 nt4.07□□□□□ -1.76
TY2B-LR1P0C2J3 YDR061WYDR061W 1620 nt4.06□□□□□ -1.76
TY2B-LR1P0C2J3 YIL102C-AYIL102C-A 228 nt4.06□□□□□ -1.76
TY2B-LR1P0C2J3 DGA1YOR245C 1257 nt4.06□□□□□ -1.76
TY2B-LR1P0C2J3 RRD2YPL152W 1077 nt4.06□□□□□ -1.76
TY2B-LR1P0C2J3 PTI1YGR156W 1278 nt4.05□□□□□ -1.76
TY2B-LR1P0C2J3 RSA1YPL193W 1146 nt4.05□□□□□ -1.76
TY2B-LR1P0C2J3 MSN2YMR037C 2115 nt4.05□□□□□ -1.76
TY2B-LR1P0C2J3 TRK1YJL129C 3708 nt4.04□□□□□ -1.76
TY2B-LR1P0C2J3 PSY1YKL076C 384 nt4.04□□□□□ -1.76
TY2B-LR1P0C2J3 DIM1YPL266W 957 nt4.04□□□□□ -1.76
TY2B-LR1P0C2J3 TCO89YPL180W 2400 nt4.04□□□□□ -1.76
TY2B-LR1P0C2J3 SEO1YAL067C 1782 nt4.03□□□□□ -1.76
TY2B-LR1P0C2J3 UBP15YMR304W 3693 nt4.03□□□□□ -1.76
TY2B-LR1P0C2J3 YCR045W-AYCR045W-A 351 nt4.03□□□□□ -1.76
TY2B-LR1P0C2J3 AXL1YPR122W 3627 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 SWP1YMR149W 861 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 END3YNL084C 1050 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 RPB8YOR224C 441 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 MSB1YOR188W 3414 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 PUT3YKL015W 2940 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 MCA1YOR197W 1299 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 YBR242WYBR242W 717 nt4.02□□□□□ -1.77
TY2B-LR1P0C2J3 APL5YPL195W 2799 nt4.01□□□□□ -1.77
TY2B-LR1P0C2J3 MDM38YOL027C 1722 nt4.01□□□□□ -1.77
TY2B-LR1P0C2J3 CDC11YJR076C 1248 nt4.01□□□□□ -1.77
TY2B-LR1P0C2J3 PPA2YMR267W 933 nt4.01□□□□□ -1.77
TY2B-LR1P0C2J3 MBP1YDL056W 2502 nt4.01□□□□□ -1.77
TY2B-LR1P0C2J3 BET3YKR068C 582 nt4□□□□□ -1.77
TY2B-LR1P0C2J3 YHR080CYHR080C 4038 nt4□□□□□ -1.77
TY2B-LR1P0C2J3 SGS1YMR190C 4344 nt3.99□□□□□ -1.77
TY2B-LR1P0C2J3 GRE3YHR104W 984 nt3.99□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms