Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSF1P09603 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.67■□□□□ 0.58
CSF1P09603 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.67■□□□□ 0.58
CSF1P09603 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.67■□□□□ 0.58
CSF1P09603 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSF1P09603 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.66■□□□□ 0.58
CSF1P09603 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.66■□□□□ 0.58
CSF1P09603 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CSF1P09603 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSF1P09603 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSF1P09603 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.66■□□□□ 0.58
CSF1P09603 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSF1P09603 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CSF1P09603 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSF1P09603 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.65■□□□□ 0.58
CSF1P09603 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSF1P09603 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.65■□□□□ 0.58
CSF1P09603 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CSF1P09603 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.65■□□□□ 0.58
CSF1P09603 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSF1P09603 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.65■□□□□ 0.58
CSF1P09603 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.65■□□□□ 0.58
CSF1P09603 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CSF1P09603 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSF1P09603 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSF1P09603 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CSF1P09603 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CSF1P09603 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CSF1P09603 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 KRT16P3-201ENST00000439127 1283 ntBASIC18.64■□□□□ 0.57
CSF1P09603 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.64■□□□□ 0.57
CSF1P09603 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CSF1P09603 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CSF1P09603 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
CSF1P09603 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.63■□□□□ 0.57
CSF1P09603 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSF1P09603 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CSF1P09603 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.63■□□□□ 0.57
CSF1P09603 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CSF1P09603 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.63■□□□□ 0.57
CSF1P09603 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.63■□□□□ 0.57
CSF1P09603 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CSF1P09603 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.63■□□□□ 0.57
CSF1P09603 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.63■□□□□ 0.57
CSF1P09603 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CSF1P09603 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSF1P09603 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
CSF1P09603 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CSF1P09603 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 MIR935-201ENST00000401179 91 ntBASIC18.62■□□□□ 0.57
CSF1P09603 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.62■□□□□ 0.57
CSF1P09603 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CSF1P09603 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.62■□□□□ 0.57
CSF1P09603 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CSF1P09603 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.62■□□□□ 0.57
CSF1P09603 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CSF1P09603 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CSF1P09603 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.61■□□□□ 0.57
CSF1P09603 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CSF1P09603 AC144652.1-201ENST00000609974 1624 ntBASIC18.61■□□□□ 0.57
CSF1P09603 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms