Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GYPBP06028 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GYPBP06028 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GYPBP06028 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GYPBP06028 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GYPBP06028 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GYPBP06028 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.42■□□□□ 0.7
GYPBP06028 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.42■□□□□ 0.7
GYPBP06028 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.42■□□□□ 0.7
GYPBP06028 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.42■□□□□ 0.7
GYPBP06028 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
GYPBP06028 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.42■□□□□ 0.7
GYPBP06028 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
GYPBP06028 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GYPBP06028 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GYPBP06028 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GYPBP06028 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GYPBP06028 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GYPBP06028 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.41■□□□□ 0.7
GYPBP06028 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.41■□□□□ 0.7
GYPBP06028 AL499627.2-201ENST00000606283 725 ntBASIC19.41■□□□□ 0.7
GYPBP06028 MIR6724-1-201ENST00000616420 92 ntBASIC19.41■□□□□ 0.7
GYPBP06028 MIR6724-2-201ENST00000616483 92 ntBASIC19.41■□□□□ 0.7
GYPBP06028 MIR6724-4-201ENST00000617390 92 ntBASIC19.41■□□□□ 0.7
GYPBP06028 MIR6724-3-201ENST00000622482 92 ntBASIC19.41■□□□□ 0.7
GYPBP06028 AL117332.1-201ENST00000622628 974 ntBASIC19.41■□□□□ 0.7
GYPBP06028 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GYPBP06028 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
GYPBP06028 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
GYPBP06028 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.4■□□□□ 0.7
GYPBP06028 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
GYPBP06028 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GYPBP06028 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.4■□□□□ 0.7
GYPBP06028 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.4■□□□□ 0.7
GYPBP06028 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.4■□□□□ 0.7
GYPBP06028 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
GYPBP06028 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GYPBP06028 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
GYPBP06028 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
GYPBP06028 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GYPBP06028 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.39■□□□□ 0.69
GYPBP06028 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
GYPBP06028 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GYPBP06028 AC005229.4-201ENST00000610085 2198 ntBASIC19.39■□□□□ 0.69
GYPBP06028 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.39■□□□□ 0.69
GYPBP06028 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.39■□□□□ 0.69
GYPBP06028 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GYPBP06028 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.38■□□□□ 0.69
GYPBP06028 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.38■□□□□ 0.69
GYPBP06028 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.38■□□□□ 0.69
GYPBP06028 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.38■□□□□ 0.69
GYPBP06028 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GYPBP06028 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms