Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.92■□□□□ 0.62
LCATP04180 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 OR2I1P-207ENST00000453522 948 ntBASIC18.92■□□□□ 0.62
LCATP04180 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.92■□□□□ 0.62
LCATP04180 AL031602.1-201ENST00000633169 911 ntBASIC18.92■□□□□ 0.62
LCATP04180 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LCATP04180 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LCATP04180 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LCATP04180 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.91■□□□□ 0.62
LCATP04180 AC011298.3-201ENST00000615796 283 ntBASIC18.91■□□□□ 0.62
LCATP04180 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.91■□□□□ 0.62
LCATP04180 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
LCATP04180 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.91■□□□□ 0.62
LCATP04180 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
LCATP04180 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
LCATP04180 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LCATP04180 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.9■□□□□ 0.62
LCATP04180 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LCATP04180 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.9■□□□□ 0.62
LCATP04180 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.9■□□□□ 0.62
LCATP04180 AC136469.2-201ENST00000623944 1028 ntBASIC18.9■□□□□ 0.62
LCATP04180 AC068587.7-201ENST00000641602 218 ntBASIC18.9■□□□□ 0.62
LCATP04180 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.9■□□□□ 0.62
LCATP04180 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LCATP04180 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
LCATP04180 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.89■□□□□ 0.62
LCATP04180 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
LCATP04180 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
LCATP04180 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LCATP04180 LINC00565-201ENST00000562710 2331 ntBASIC18.89■□□□□ 0.61
LCATP04180 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.89■□□□□ 0.61
LCATP04180 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 AC010525.1-201ENST00000585559 441 ntBASIC18.89■□□□□ 0.61
LCATP04180 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.89■□□□□ 0.61
LCATP04180 AC087239.1-201ENST00000622671 572 ntBASIC18.89■□□□□ 0.61
LCATP04180 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LCATP04180 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LCATP04180 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
LCATP04180 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.88■□□□□ 0.61
LCATP04180 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LCATP04180 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.88■□□□□ 0.61
LCATP04180 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.88■□□□□ 0.61
LCATP04180 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
LCATP04180 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.88■□□□□ 0.61
LCATP04180 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
LCATP04180 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
LCATP04180 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LCATP04180 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCATP04180 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCATP04180 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCATP04180 UNC93B3-201ENST00000308076 687 ntBASIC18.87■□□□□ 0.61
LCATP04180 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCATP04180 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LCATP04180 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms