Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
MT-ND1P03886 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND1P03886 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
MT-ND1P03886 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND1P03886 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.39■□□□□ 0.85
MT-ND1P03886 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.39■□□□□ 0.85
MT-ND1P03886 AL157384.1-201ENST00000445995 2473 ntBASIC20.39■□□□□ 0.85
MT-ND1P03886 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
MT-ND1P03886 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
MT-ND1P03886 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
MT-ND1P03886 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.38■□□□□ 0.85
MT-ND1P03886 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
MT-ND1P03886 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
MT-ND1P03886 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
MT-ND1P03886 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.38■□□□□ 0.85
MT-ND1P03886 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.38■□□□□ 0.85
MT-ND1P03886 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.38■□□□□ 0.85
MT-ND1P03886 AC244015.2-201ENST00000616358 1861 ntBASIC20.38■□□□□ 0.85
MT-ND1P03886 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
MT-ND1P03886 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
MT-ND1P03886 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
MT-ND1P03886 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.37■□□□□ 0.85
MT-ND1P03886 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
MT-ND1P03886 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
MT-ND1P03886 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MT-ND1P03886 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
MT-ND1P03886 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
MT-ND1P03886 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND1P03886 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.36■□□□□ 0.85
MT-ND1P03886 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND1P03886 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND1P03886 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.36■□□□□ 0.85
MT-ND1P03886 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.36■□□□□ 0.85
MT-ND1P03886 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
MT-ND1P03886 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
MT-ND1P03886 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND1P03886 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND1P03886 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
MT-ND1P03886 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
MT-ND1P03886 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.35■□□□□ 0.85
MT-ND1P03886 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND1P03886 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND1P03886 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MT-ND1P03886 AC021242.3-201ENST00000607598 1377 ntBASIC20.34■□□□□ 0.85
MT-ND1P03886 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
MT-ND1P03886 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
MT-ND1P03886 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.34■□□□□ 0.85
MT-ND1P03886 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MT-ND1P03886 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND1P03886 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND1P03886 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND1P03886 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.33■□□□□ 0.85
MT-ND1P03886 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
MT-ND1P03886 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND1P03886 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND1P03886 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.33■□□□□ 0.85
MT-ND1P03886 BX664725.1-201ENST00000438252 379 ntBASIC20.33■□□□□ 0.85
MT-ND1P03886 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MT-ND1P03886 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.33■□□□□ 0.85
MT-ND1P03886 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.33■□□□□ 0.85
MT-ND1P03886 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.33■□□□□ 0.85
MT-ND1P03886 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
MT-ND1P03886 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND1P03886 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND1P03886 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MT-ND1P03886 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MT-ND1P03886 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms